RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CEP76Q8TAP6 659 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF514Q96K75 400 aaPredicted RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 IKZF2Q9UKS7 526 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 PPIEQ9UNP9 301 aaKnown RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 PRELID1Q9Y255 219 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 CDH10Q9Y6N8 788 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 CLDN4O14493 209 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 TLR5O60602 858 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ABCB7O75027 752 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 RENP00797 406 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ALPPP05187 535 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 SLC35G6P0C7Q6 338 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ITPKAP23677 461 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 GRIA1P42261 906 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 SMSP52788 366 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 NBPF12Q5TAG4 269 aaPredicted RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 C1orf189Q5VU69 101 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 SLC25A25Q6KCM7 469 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 CHCHD4Q8N4Q1 142 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF527Q8NB42 609 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 OR5B17Q8NGF7 314 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 LRRC58Q96CX6 371 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 KCNS3Q9BQ31 491 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 GTPBP2Q9BX10 602 aaKnown RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 POLR2J3Q9H1A7 115 aaKnown RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 USP29Q9HBJ7 922 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF304Q9HCX3 659 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 MAU2Q9Y6X3 613 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 AZGP1P25311 298 aaKnown RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 SLC1A2P43004 574 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 OR2T5Q6IEZ7 315 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 CHRDL2Q6WN34 429 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 OR2T29Q8NH02 315 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 MFSD1Q9H3U5 465 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 COPS7AQ9UBW8 275 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ALG5Q9Y673 324 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 DAPL1A0PJW8 107 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 H0Y858 1186 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 TBX1O43435 398 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 RP2O75695 350 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 KAT7O95251 611 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 AQP1P29972 269 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 SNAP47Q5SQN1 464 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 PRAMEF17Q5VTA0 474 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 MSANTD1Q6ZTZ1 278 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 RELL1Q8IUW5 271 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 TOMM5Q8N4H5 51 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 SLC4A9Q96Q91 983 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 CYP2S1Q96SQ9 504 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 P2RX7Q99572 595 aaKnown RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 TBC1D17Q9HA65 648 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF69Q9UC07 566 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 DUXAA6NLW8 204 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 TLX3O43711 291 aaPredicted RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 NADK2Q4G0N4 442 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 GRHL2Q6ISB3 625 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 EPGNQ6UW88 154 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ABHD15Q6UXT9 468 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 GALNT7Q86SF2 657 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ARMC10Q8N2F6 343 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 VANGL1Q8TAA9 524 aaPredicted RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 SLC35G5Q96KT7 338 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 FEM1AQ9BSK4 669 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 MAST2Q6P0Q8 1798 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 TJP1Q07157 1748 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF33AQ06730 810 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 C2orf80Q0P641 193 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 TUBB3Q13509 450 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 RHEBQ15382 184 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 SH3PXD2AQ5TCZ1 1133 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 NUP54Q7Z3B4 507 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 STON2Q8WXE9 905 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 CEP295NLQ96MC4 621 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 RSPH9Q9H1X1 276 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 MMP27Q9H306 513 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ZDHHC18Q9NUE0 388 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 PCDHGA3Q9Y5H0 932 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 RGPD5Q99666 1765 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 AXIN1O15169 862 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 GOT2P00505 430 aaKnown RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 IL1BP01584 269 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF806P0C7X5 589 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 PVALBP20472 110 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 NPR2P20594 1047 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 HCAR3P49019 387 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 KCNJ11Q14654 390 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 OGFOD2Q6N063 350 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 PAOXQ6QHF9 649 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ERMP1Q7Z2K6 904 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 CPA6Q8N4T0 437 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 NTAN1Q96AB6 310 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 BCL7BQ9BQE9 202 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ACAT2Q9BWD1 397 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 NEUROD4Q9HD90 331 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 SPATA7Q9P0W8 599 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 FER1L6Q2WGJ9 1857 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 A0A1B0GVC2 190 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 CTPS1P17812 591 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 TUSC3Q13454 348 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms