RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 MPP7Q5T2T1 576 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 SULT1C3Q6IMI6 304 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 EP400NLQ6ZTU2 488 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 CHST15Q7LFX5 561 aaPredicted RBP11.51□□□□□ -0.57
RHO-201ENST00000296271 AHI1Q8N157 1196 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 FBXO30Q8TB52 745 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 MAGEE2Q8TD90 523 aaPredicted RBP11.51□□□□□ -0.57
RHO-201ENST00000296271 CYGBQ8WWM9 190 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 FIG4Q92562 907 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 GTF2H4Q92759 462 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 LYSMD1Q96S90 227 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 INPP5KQ9BT40 448 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 LIN28AQ9H9Z2 209 aaKnown RBP11.51□□□□□ -0.57
RHO-201ENST00000296271 MYO9BQ13459 2157 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 WDR47O94967 919 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 SNAP29O95721 258 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 RHOP08100 348 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 AOAHP28039 575 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 PCSK6P29122 969 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 CDKN2CP42773 168 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 YAP1P46937 504 aaKnown RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 PREPP48147 710 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 TXNL4AP83876 142 aaKnown RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 ILF2Q12905 390 aaKnown RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 ABRQ12979 859 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 APOFQ13790 326 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 GPR33Q49SQ1 333 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 COQ5Q5HYK3 327 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 EFL1Q7Z2Z2 1120 aaKnown RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 PTRH1Q86Y79 214 aaKnown RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 TFAP2CQ92754 450 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 IRF7Q92985 503 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 APIPQ96GX9 242 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 MCCC1Q96RQ3 725 aaPredicted RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 THUMPD3Q9BV44 507 aaKnown RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 CHID1Q9BWS9 393 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 EBPLQ9BY08 206 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 ZNF696Q9H7X3 374 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.5□□□□□ -0.57
RHO-201ENST00000296271 TDP1Q9NUW8 608 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 CNOT11Q9UKZ1 510 aaKnown RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 COQ6Q9Y2Z9 468 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 PRUNE2Q8WUY3 3088 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 CLGNO14967 610 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 HNRNPRO43390 633 aaKnown RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 ADH1AP07327 375 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 ENO2P09104 434 aaPredicted RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 BCKDHAP12694 445 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 RFC2P35250 354 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 CTSCP53634 463 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 SLC14A1Q13336 389 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 PLCL1Q15111 1095 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 KRT80Q6KB66 452 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 GDPD4Q6W3E5 623 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 GRASPQ7Z6J2 395 aaPredicted RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 GALNT10Q86SR1 603 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 RBM23Q86U06 439 aaKnown RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 TRIM74Q86UV6 250 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 C12orf40Q86WS4 652 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 CBARPQ8N350 705 aaPredicted RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 GALNT15Q8N3T1 639 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 SLC13A3Q8WWT9 602 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 ZFYVE19Q96K21 471 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 RIOK2Q9BVS4 552 aaKnown RBP11.5□□□□□ -0.57
RHO-201ENST00000296271 OSBPL11Q9BXB4 747 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 NTN4Q9HB63 628 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 LRTM1Q9HBL6 345 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 PCDH12Q9NPG4 1184 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 KCTD5Q9NXV2 234 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 ANAPC2Q9UJX6 822 aa11.5□□□□□ -0.57
RHO-201ENST00000296271 GRM6O15303 877 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 AHCYL1O43865 530 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 POP4O95707 220 aaKnown RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 MYOGP15173 224 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 PBLDP30039 288 aaPredicted RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 RPL5P46777 297 aaKnown RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 GNPDA1P46926 289 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 FOXM1Q08050 763 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 GRIK2Q13002 908 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 GRIN2CQ14957 1233 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 ATP6AP1Q15904 470 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 ELMOD1Q8N336 334 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 CENPNQ96H22 339 aaPredicted RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 PHF12Q96QT6 1004 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 NRTNQ99748 197 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 DPY30Q9C005 99 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 TRIM4Q9C037 500 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 SPHK2Q9NRA0 654 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 SLC25A13Q9UJS0 675 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 PPT2Q9UMR5 302 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 ERVK-11Q9UQG0 969 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 GOLGA4Q13439 2230 aaKnown RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 B4GAT1O43505 415 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 CLDN9O95484 217 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 PGRP06401 933 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 ANXA5P08758 320 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 ATP1B2P14415 290 aaPredicted RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 ZNF23P17027 643 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 CD22P20273 847 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms