RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 AHSGP02765 367 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 SLC35G4P0C7Q5 338 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 MSL3P1P0C860 447 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 NELFEP18615 380 aaKnown RBP8.89□□□□□ -0.99
HMGN1-201ENST00000288344 PGAM1P18669 254 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 NDUFS1P28331 727 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 PEBP1P30086 187 aaKnown RBP8.89□□□□□ -0.99
HMGN1-201ENST00000288344 ELK3P41970 407 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 GABRA4P48169 554 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 KPNA2P52292 529 aaKnown RBP8.89□□□□□ -0.99
HMGN1-201ENST00000288344 CLN3Q13286 438 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 FASTKD3Q14CZ7 662 aaKnown RBP8.89□□□□□ -0.99
HMGN1-201ENST00000288344 KYNUQ16719 465 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 LONRF1Q17RB8 773 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 MAP9Q49MG5 647 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 HSP90AA5PQ58FG0 334 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 PLEKHS1Q5SXH7 462 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 MRNIPQ6NTE8 343 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 CNSTQ6PJW8 725 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 LMNTD2Q8IXW0 634 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 TBC1D21Q8IYX1 336 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 CARFQ8N187 725 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 AGBL5Q8NDL9 886 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 OR52E1Q8NGJ3 308 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 OR5AR1Q8NGP9 310 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 OR5K2Q8NHB8 316 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 ASZ1Q8WWH4 475 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 ELMO1Q92556 727 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 USP7Q93009 1102 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 ART4Q93070 314 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 ZNF669Q96BR6 464 aaPredicted RBP8.89□□□□□ -0.99
HMGN1-201ENST00000288344 SNF8Q96H20 258 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 TAAR9Q96RI9 348 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 TTC1Q99614 292 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 NAT9Q9BTE0 207 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 DDA1Q9BW61 102 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 STRADBQ9C0K7 418 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 CHRNA10Q9GZZ6 450 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 TSPAN10Q9H1Z9 355 aaPredicted RBP8.89□□□□□ -0.99
HMGN1-201ENST00000288344 VPS37BQ9H9H4 285 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 APMAPQ9HDC9 416 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 ENAMQ9NRM1 1142 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 ZDHHC18Q9NUE0 388 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 IMP3Q9NV31 184 aaKnown RBP8.89□□□□□ -0.99
HMGN1-201ENST00000288344 HRASLS2Q9NWW9 162 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 WHRNQ9P202 907 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 ASIC3Q9UHC3 531 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 PILRAQ9UKJ1 303 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 FBXO5Q9UKT4 447 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 ICKQ9UPZ9 632 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 CRYL1Q9Y2S2 319 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 HEBP2Q9Y5Z4 205 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 B3GALT1Q9Y5Z6 326 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 COLEC10Q9Y6Z7 277 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 EFCAB8A8MWE9 144 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 GFYI3L273 518 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 J3QL48 77 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 TERTO14746 1132 aaKnown RBP8.88□□□□□ -0.99
HMGN1-201ENST00000288344 PRAMEF10O60809 474 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 NIPSNAP2O75323 286 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 NDUFS3O75489 264 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 TUBB4AP04350 444 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 ERVK-10P10266 1014 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 ERGP11308 486 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 FGF5P12034 268 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 PKMP14618 531 aaKnown RBP8.88□□□□□ -0.99
HMGN1-201ENST00000288344 PRDX3P30048 256 aaKnown RBP8.88□□□□□ -0.99
HMGN1-201ENST00000288344 ATP5DP30049 168 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 FMO4P31512 558 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 PPARGP37231 505 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-201ENST00000288344 SLC1A2P43004 574 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 C2orf54Q08AI8 447 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 DNAJC21Q5F1R6 531 aaKnown RBP8.88□□□□□ -0.99
HMGN1-201ENST00000288344 ACSBG2Q5FVE4 666 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 SPANXN3Q5MJ09 141 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 PHF19Q5T6S3 580 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 RNF187Q5TA31 235 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-201ENST00000288344 TIPARPQ7Z3E1 657 aaKnown RBP8.88□□□□□ -0.99
HMGN1-201ENST00000288344 MAATS1Q7Z4T9 603 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 SDCCAG8Q86SQ7 713 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-201ENST00000288344 SPACA3Q8IXA5 215 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 D2HGDHQ8N465 521 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 MMGT1Q8N4V1 131 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 LINC01555Q8NAE3 123 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 OR4E2Q8NGC2 313 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 HMGCLL1Q8TB92 370 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 DENND1AQ8TEH3 1009 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 DLG3Q92796 817 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 KCNJ9Q92806 393 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.88□□□□□ -0.99
HMGN1-201ENST00000288344 C16orf45Q96MC5 204 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-201ENST00000288344 OR2A14Q96R47 310 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 FERD3LQ96RJ6 166 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 CD180Q99467 661 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 MAP3K3Q99759 626 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 AARSD1Q9BTE6 412 aaKnown RBP8.88□□□□□ -0.99
HMGN1-201ENST00000288344 DPH1Q9BZG8 443 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 PRORYQ9H606 182 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 STN1Q9H668 368 aaKnown RBP8.88□□□□□ -0.99
HMGN1-201ENST00000288344 SMYD2Q9NRG4 433 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms