RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 KRT80Q6KB66 452 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 MBOAT1Q6ZNC8 495 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 NEK10Q6ZWH5 1172 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 UBE2R2Q712K3 238 aaPredicted RBP15.81■□□□□ 0.12
UBE3D-201ENST00000237186 ADIPOR2Q86V24 386 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 ALDH16A1Q8IZ83 802 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 DTWD1Q8N5C7 304 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 CHST14Q8NCH0 376 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 TSPAN14Q8NG11 270 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 OR52E4Q8NGH9 312 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 OSCP1Q8WVF1 389 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 DPY30Q9C005 99 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 TRIM4Q9C037 500 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 CD320Q9NPF0 282 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 OAZ3Q9UMX2 235 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 USP22Q9UPT9 525 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 KIAA0100Q14667 2235 aaKnown RBP15.8■□□□□ 0.12
UBE3D-201ENST00000237186 KCNE1BA0A087WTH5 132 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 RNF103-CHMP3A0A140T963 221 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 PDLIM1O00151 329 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 PLOD2O00469 737 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 BNIP3LO60238 219 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 TPST1O60507 370 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 SEC22BO75396 215 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 PRSS23O95084 383 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 LDLRP01130 860 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 ACRP10323 421 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 MTPNP58546 118 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 MAPKAPK3Q16644 382 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 IMPG1Q17R60 797 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 ELMSAN1Q6PJG2 1045 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 RALGPS2Q86X27 583 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-201ENST00000237186 FAM9CQ8IZT9 166 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 DNAJC5GQ8N7S2 189 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 L3MBTL4Q8NA19 623 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 NUDT8Q8WV74 236 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 SH3GL1Q99961 368 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 FAM83CQ9BQN1 747 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 ADI1Q9BV57 179 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 CHID1Q9BWS9 393 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 BBS2Q9BXC9 721 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 ACTR8Q9H981 624 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 VCX3AQ9NNX9 186 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 TLR9Q9NR96 1032 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 TDP1Q9NUW8 608 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 VAPAQ9P0L0 249 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 NFKBIL1Q9UBC1 381 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-201ENST00000237186 MBD1Q9UIS9 605 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-201ENST00000237186 MKI67P46013 3256 aaKnown RBP15.8■□□□□ 0.12
UBE3D-201ENST00000237186 MYOCOSA0A1B0GUC4 107 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 TSPAN11A1L157 253 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 TRIM64A6NGJ6 449 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 NEDD8-MDP1E9PL57 170 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 AP2A2O94973 939 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 PGRP06401 933 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 ANXA6P08133 673 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 HIST1H2AGP0C0S8 130 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-201ENST00000237186 CYP2A6P11509 494 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-201ENST00000237186 ATP6V1B1P15313 513 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 ZNF23P17027 643 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 HIST1H2ADP20671 130 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 LBX1P52954 281 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 AP1S2P56377 157 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 PLOD1Q02809 727 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-201ENST00000237186 LSAMPQ13449 338 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 BOP1Q14137 746 aaKnown RBP15.8■□□□□ 0.12
UBE3D-201ENST00000237186 FAM174BQ3ZCQ3 159 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 SUSD1Q6UWL2 747 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 Q6ZVU0 165 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 LIX1Q8N485 282 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 TNIP2Q8NFZ5 429 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 TCEAL4Q96EI5 215 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 RMND5BQ96G75 393 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-201ENST00000237186 HIST1H2AHQ96KK5 128 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 MAGEB10Q96LZ2 347 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-201ENST00000237186 HIST1H2AJQ99878 128 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 H2AFJQ9BTM1 129 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 BDH2Q9BUT1 245 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 CLK4Q9HAZ1 481 aaKnown RBP15.8■□□□□ 0.12
UBE3D-201ENST00000237186 SPHK2Q9NRA0 654 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 HCFC1R1Q9NWW0 138 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 TBC1D14Q9P2M4 693 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 SLC8A2Q9UPR5 921 aa15.8■□□□□ 0.12
UBE3D-201ENST00000237186 TRBV5-3A0A0A0MS03 114 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 TRIM64CA6NLI5 447 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 DFNA5O60443 496 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 PRPS2P11908 318 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 BCKDHAP12694 445 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 TYRP14679 529 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 ACPPP15309 386 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 PTPN2P17706 415 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 VIPR1P32241 457 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 ALDH3B2P48448 385 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 VASPP50552 380 aaPredicted RBP15.79■□□□□ 0.12
UBE3D-201ENST00000237186 CLDN8P56748 225 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 ERVFC1P60507 584 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 HSPA14Q0VDF9 509 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 KCTD21Q4G0X4 260 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 RUNDC3AQ59EK9 446 aa15.79■□□□□ 0.12
UBE3D-201ENST00000237186 NAIF1Q69YI7 327 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms