RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 COPEO14579 308 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 NOBOXO60393 691 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 GLRA3O75311 464 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 C1orf105O95561 183 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 SYF2O95926 243 aaKnown RBP12.01□□□□□ -0.49
LINC00339-213ENST00000642137 CATP04040 527 aaKnown RBP12.01□□□□□ -0.49
LINC00339-213ENST00000642137 RPN2P04844 631 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 ENO2P09104 434 aaPredicted RBP12.01□□□□□ -0.49
LINC00339-213ENST00000642137 RBP1P09455 135 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 MTHFD1P11586 935 aaKnown RBP12.01□□□□□ -0.49
LINC00339-213ENST00000642137 TFEBP19484 476 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 GMPRP36959 345 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 KPNA2P52292 529 aaKnown RBP12.01□□□□□ -0.49
LINC00339-213ENST00000642137 SP140Q13342 867 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 ZCCHC8Q6NZY4 707 aaKnown RBP12.01□□□□□ -0.49
LINC00339-213ENST00000642137 TTC23LQ6PF05 361 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 UBE2R2Q712K3 238 aaPredicted RBP12.01□□□□□ -0.49
LINC00339-213ENST00000642137 RBM12BQ8IXT5 1001 aaKnown RBP12.01□□□□□ -0.49
LINC00339-213ENST00000642137 C4orf33Q8N1A6 199 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 ARL14Q8N4G2 192 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 SPATA6LQ8N4H0 392 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 FAM181AQ8N9Y4 354 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 PHC3Q8NDX5 983 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 OR5K2Q8NHB8 316 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 CFAP61Q8NHU2 1237 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 STAG3L4Q8TBR4 150 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 MAPK15Q8TD08 544 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 MCOLN3Q8TDD5 553 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 CXorf40BQ96DE9 158 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 ATP6V1G3Q96LB4 118 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 TRIT1Q9H3H1 467 aaKnown RBP12.01□□□□□ -0.49
LINC00339-213ENST00000642137 RDH14Q9HBH5 336 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 PARVBQ9HBI1 364 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 TMEM9BQ9NQ34 198 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 ZNF358Q9NW07 568 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 ASF1AQ9Y294 204 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 OR52A4PA6NMU1 304 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 B4DGG1 531 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 BTN3A1O00481 513 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 TRIM38O00635 465 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 VIPP01282 170 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 HIST1H2AGP0C0S8 130 aaPredicted RBP12□□□□□ -0.49
LINC00339-213ENST00000642137 CREB1P16220 341 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 HIST1H2ADP20671 130 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 CYP2A7P20853 494 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 MAP4P27816 1152 aaKnown RBP12□□□□□ -0.49
LINC00339-213ENST00000642137 FASLGP48023 281 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 RPIAP49247 311 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 UBE2IP63279 158 aaKnown RBP12□□□□□ -0.49
LINC00339-213ENST00000642137 KRT33BQ14525 404 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 CCDC153Q494R4 210 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 AASDHQ4L235 1098 aaPredicted RBP12□□□□□ -0.49
LINC00339-213ENST00000642137 SBSNQ6UWP8 590 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 ADAMTSL2Q86TH1 951 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 ARL10Q8N8L6 244 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 OR6C4Q8NGE1 309 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 DLG3Q92796 817 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 RAD51AP1Q96B01 352 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 SH3KBP1Q96B97 665 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 PTERQ96BW5 349 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 APOPT1Q96IL0 206 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 HIST1H2AHQ96KK5 128 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 PHOX2BQ99453 314 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 HIST1H2AJQ99878 128 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 MRPL57Q9BQC6 102 aaKnown RBP12□□□□□ -0.49
LINC00339-213ENST00000642137 H2AFJQ9BTM1 129 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 EDEM2Q9BV94 578 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 TRIM54Q9BYV2 358 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 SLC40A1Q9NP59 571 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 POT1Q9NUX5 634 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 TMEM216Q9P0N5 145 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 CPNE7Q9UBL6 633 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 TSR3Q9UJK0 312 aaKnown RBP12□□□□□ -0.49
LINC00339-213ENST00000642137 ADAMTS6Q9UKP5 1117 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 IKZF3Q9UKT9 509 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 PDE10AQ9Y233 779 aa12□□□□□ -0.49
LINC00339-213ENST00000642137 CFAP20Q9Y6A4 193 aaKnown RBP12□□□□□ -0.49
LINC00339-213ENST00000642137 ARID1BQ8NFD5 2236 aaPredicted RBP12□□□□□ -0.49
LINC00339-213ENST00000642137 USP34Q70CQ2 3546 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 HMGB1P1B2RPK0 211 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-213ENST00000642137 FFAR2O15552 330 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 FLRT2O43155 660 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 TYROBPO43914 113 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 KDM1AO60341 852 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 KCNC1P48547 511 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 SLC18A1P54219 525 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 MAGOHP61326 146 aaKnown RBP11.99□□□□□ -0.49
LINC00339-213ENST00000642137 CDKL1Q00532 357 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 GPS2Q13227 327 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 OR4D1Q15615 310 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 TSNQ15631 228 aaKnown RBP11.99□□□□□ -0.49
LINC00339-213ENST00000642137 INAVAQ3KP66 663 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 C14orf28Q4W4Y0 310 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 TTMPQ5BVD1 217 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 TECRLQ5HYJ1 363 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 CDKL4Q5MAI5 379 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-213ENST00000642137 N4BP2L1Q5TBK1 243 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-213ENST00000642137 CDHR3Q6ZTQ4 885 aa11.99□□□□□ -0.49
LINC00339-213ENST00000642137 ASCL5Q7RTU5 278 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms