RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 NIPAL2Q9H841 368 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 SMURF1Q9HCE7 757 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 AHSPQ9NZD4 102 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 NOD1Q9Y239 953 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 TIMM22Q9Y584 194 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 DLEC1Q9Y238 1755 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 NEMP2A6NFY4 417 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 PLD2O14939 933 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 KPNA5O15131 536 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 SLC16A6O15403 523 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 UGT2B17O75795 530 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 OR7A10O76100 309 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 CCNB2O95067 398 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 PRAMEF1O95521 474 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 GNAO1P09471 354 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 BMP4P12644 408 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 SLC6A4P31645 630 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 PBX3P40426 434 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 PPP3R1P63098 170 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ACSM2AQ08AH3 577 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 SCAPQ12770 1279 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 SLC10A2Q12908 348 aaPredicted RBP4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 SYT16Q17RD7 645 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 PARP15Q460N3 678 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 IFI44LQ53G44 452 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ACSM2BQ68CK6 577 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 HMBOX1Q6NT76 420 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 FAM122CQ6P4D5 195 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 LINC00471Q8N535 108 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 OR4A15Q8NGL6 344 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ZNF675Q8TD23 568 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 PIH1D2Q8WWB5 315 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 DCPSQ96C86 337 aaKnown RBP4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 KCTD7Q96MP8 289 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 MND1Q9BWT6 205 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ATXN3LQ9H3M9 355 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 GPN1Q9HCN4 374 aaPredicted RBP4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 AKIP1Q9NQ31 210 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 FAM50BQ9Y247 325 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ASB4Q9Y574 426 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 PPP2R3BQ9Y5P8 575 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 U3KQV3 271 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 LAMB1P07942 1786 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 UBE2QL1A1L167 161 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 H3BN98 237 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 RGS13O14921 159 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 CASKO14936 926 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 DCLK1O15075 740 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 SSNA1O43805 119 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 TLL1O43897 1013 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 WBP4O75554 376 aaKnown RBP4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 REM1O75628 298 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 CDK14O94921 469 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ESR1P03372 595 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 CAPNS1P04632 268 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ALPLP05186 524 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 USP17L7P0C7H9 530 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 SLC2A2P11168 524 aaPredicted RBP4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 F8A1P23610 371 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 PPP2R1BP30154 601 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 HTR2BP41595 481 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 NR4A2P43354 598 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 TUFMP49411 452 aaKnown RBP4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ATP12AP54707 1039 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 UFM1P61960 85 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 RPS14P62263 151 aaKnown RBP4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 PITPNAQ00169 270 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 SLC13A2Q13183 592 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ZNF177Q13360 481 aaPredicted RBP4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 GTF2H2Q13888 395 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ZNF460Q14592 562 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 GTF2H2CQ6P1K8 395 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 HSDL2Q6YN16 418 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 RNF111Q6ZNA4 994 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 CATSPERGQ6ZRH7 1159 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ZNF534Q76KX8 674 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 CHST15Q7LFX5 561 aaPredicted RBP4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 SAPCD2Q86UD0 394 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ZSWIM9Q86XI8 627 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 RNF130Q86XS8 419 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 EPHX4Q8IUS5 362 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 CPNE9Q8IYJ1 553 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 KIAA0319LQ8IZA0 1049 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 DENND6BQ8NEG7 585 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 OR6J1Q8NGC5 347 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 KLHL6Q8WZ60 621 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 EDEM1Q92611 657 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 AKAP1Q92667 903 aaKnown RBP eCLIP4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ZNF566Q969W8 418 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 SH3KBP1Q96B97 665 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 CCDC115Q96NT0 180 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 TRIB3Q96RU7 358 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 AARSD1Q9BTE6 412 aaKnown RBP4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 KCNH6Q9H252 994 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 MYOZ2Q9NPC6 264 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 ACSS2Q9NR19 701 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 AFF4Q9UHB7 1163 aaKnown RBP4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 MOSPD1Q9UJG1 213 aa4.93□□□□□ -1.62
HNRNPU-230ENST00000640657 RIMKLBQ9ULI2 386 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms