RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ORC6Q9Y5N6 252 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 PLXNA4Q9HCM2 1894 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 GPR182O15218 404 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 JUNDP17535 347 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 MC4RP32245 332 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 SERPINB10P48595 397 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 MASP1P48740 699 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 TTPAP49638 278 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 SLC35A2P78381 396 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 SPANXN4Q5MJ08 99 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 ZNF362Q5T0B9 420 aaPredicted RBP19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 HIPK1Q86Z02 1210 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 PHACTR4Q8IZ21 702 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 KCNJ9Q92806 393 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 NCLNQ969V3 563 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 DUSP21Q9H596 190 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 SARS2Q9NP81 518 aaKnown RBP19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 SCHIP1Q9P0W5 487 aaPredicted RBP19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 AASSQ9UDR5 926 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 TRBV5-3A0A0A0MS03 114 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 C2orf81A6NN90 581 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 TTC34A8MYJ7 566 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 SERPINA1P01009 418 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 PRLP01236 227 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 HOXD9P28356 352 aaPredicted RBP19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 VAC14Q08AM6 782 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 NPTX1Q15818 432 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 SYT6Q5T7P8 510 aaPredicted RBP19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 NADSYN1Q6IA69 706 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 DET1Q7L5Y6 550 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 PLPP6Q8IY26 295 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 FBXO44Q9H4M3 255 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 KAT8Q9H7Z6 458 aaKnown RBP19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 SLC6A13Q9NSD5 602 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 PCDHB14Q9Y5E9 798 aa19.2■□□□□ 0.66
PDLIM3-212ENST00000620787 CCL15-CCL14A0A0B4J2E2 113 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 A0A0D9SEW6 157 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 IQCF5A8MTL0 148 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 PURAQ00577 322 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 CCL15Q16663 113 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 GCNT7Q6ZNI0 430 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 GALNT5Q7Z7M9 940 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 GALNT13Q8IUC8 556 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 C10orf111Q8N326 155 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 NETO1Q8TDF5 533 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 BRI3BPQ8WY22 251 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 ANKMY1Q9P2S6 941 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 ZMYM5Q9UJ78 669 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 TSR3Q9UJK0 312 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 EIF3LQ9Y262 564 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 TNPO3Q9Y5L0 923 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 FAM220BPB1ANY3 271 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 E5RI56 91 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 OTCP00480 354 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 PGRP06401 933 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 IGFBP5P24593 272 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 GRK4P32298 578 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 GRK3P35626 688 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 CLCN4P51793 760 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 CLCN7P51798 805 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 NCS1P62166 190 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 CLCA4Q14CN2 919 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 VARS2Q5ST30 1063 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 SBSNQ6UWP8 590 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 CYP4Z1Q86W10 505 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 CALHM3Q86XJ0 350 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 SETD9Q8NE22 299 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 SH3GL1Q99961 368 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 YIPF2Q9BWQ6 316 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 DPY30Q9C005 99 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 KLHL25Q9H0H3 589 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 IPPKQ9H8X2 491 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 POLE4Q9NR33 117 aa19.19■□□□□ 0.66
PDLIM3-212ENST00000620787 ZNF623O75123 536 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 IGLV3-27P01718 113 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 PABPC1P11940 636 aaKnown RBP19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 IL1RNP18510 177 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 LPOP22079 712 aaPredicted RBP19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 GZMMP51124 257 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 GBX1Q14549 363 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 CATSPEREQ5SY80 951 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 SHQ1Q6PI26 577 aaKnown RBP19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 MILR1Q7Z6M3 343 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 SLC22A16Q86VW1 577 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 LIX1Q8N485 282 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 KRTCAP2Q8N6L1 136 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 STARD8Q92502 1023 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 EXOC2Q96KP1 924 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 BARD1Q99728 777 aaKnown RBP19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 AP5M1Q9H0R1 490 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 CLMPQ9H6B4 373 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 MARCH2Q9P0N8 246 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 FNDC3AQ9Y2H6 1198 aaKnown RBP19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 TPRKBQ9Y3C4 175 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 MT-ND2P03891 347 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 IL6P05231 212 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 CLK3P49761 638 aaKnown RBP19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 KCNJ8Q15842 424 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 ZRANB3Q5FWF4 1079 aa19.18■□□□□ 0.66
PDLIM3-212ENST00000620787 CPZQ66K79 652 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms