RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SKAP2O75563 359 aaPredicted RBP8.72□□□□□ -1.01
CCDC47-207ENST00000612558 MATN4O95460 622 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 CBX6O95503 412 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 ESRRBO95718 433 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 PAK4O96013 591 aaPredicted RBP8.72□□□□□ -1.01
CCDC47-207ENST00000612558 PCCBP05166 539 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 JUNP05412 331 aaKnown RBP8.72□□□□□ -1.01
CCDC47-207ENST00000612558 ACADMP11310 421 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 FOSL2P15408 326 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 NCF2P19878 526 aaPredicted RBP8.72□□□□□ -1.01
CCDC47-207ENST00000612558 CYP2A7P20853 494 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 TARSP26639 723 aaKnown RBP8.72□□□□□ -1.01
CCDC47-207ENST00000612558 EPHA3P29320 983 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 ADPRHP54922 357 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 INHBCP55103 352 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 PKNOX1P55347 436 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 PLOD1Q02809 727 aaPredicted RBP8.72□□□□□ -1.01
CCDC47-207ENST00000612558 BTKQ06187 659 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 RBBP7Q16576 425 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 MAP7D1Q3KQU3 841 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 LSM12Q3MHD2 195 aaKnown RBP8.72□□□□□ -1.01
CCDC47-207ENST00000612558 UGT3A2Q3SY77 523 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 CLEC6AQ6EIG7 209 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 NEK5Q6P3R8 708 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 HEATR4Q86WZ0 1026 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 TRAPPC5Q8IUR0 188 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 RASGRP3Q8IV61 690 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 TCAIMQ8N3R3 496 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 CEP70Q8NHQ1 597 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 MCOLN3Q8TDD5 553 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 ACTRT2Q8TDY3 377 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 UBTD2Q8WUN7 234 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 GLMNQ92990 594 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 ESAMQ96AP7 390 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 KLHL29Q96CT2 875 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 PRR11Q96HE9 360 aaPredicted RBP8.72□□□□□ -1.01
CCDC47-207ENST00000612558 PPP1R36Q96LQ0 422 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 OR52B2Q96RD2 323 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 C1QTNF7Q9BXJ2 289 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 SLC17A9Q9BYT1 436 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 SLC6A17Q9H1V8 727 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 ZBTB26Q9HCK0 441 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 PREBQ9HCU5 417 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 ARL8BQ9NVJ2 186 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 WWOXQ9NZC7 414 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 EIF2B4Q9UI10 523 aaKnown RBP8.72□□□□□ -1.01
CCDC47-207ENST00000612558 MMP17Q9ULZ9 603 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 PDE10AQ9Y233 779 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 STK38LQ9Y2H1 464 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 FIS1Q9Y3D6 152 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 TBC1D3DA0A087WVF3 549 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TBC1D3IA0A087WXS9 549 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TBC1D3EA0A087X179 549 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TBC1D3KA0A087X1G2 549 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 A0A1W2PQU0 124 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TBC1D3FA6NER0 549 aaPredicted RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 CFAP73A6NFT4 308 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TMEM202A6NGA9 273 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 PRR5-ARHGAP8B1AHC4 643 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TBC1D3LB9A6J9 549 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 E9PBE3 544 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 SDHDO14521 159 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 KLHL41O60662 606 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 RNGTTO60942 597 aaKnown RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 CRCPO75575 148 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TBC1D3HP0C7X1 549 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 ESRRAP11474 423 aaPredicted RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 ZNF8P17098 575 aaPredicted RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 AOC1P19801 751 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 CD72P21854 359 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 CALB2P22676 271 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 GGT5P36269 586 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TRIM23P36406 574 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 HSPA7P48741 367 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 HNMTP50135 292 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 CCR3P51677 355 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 AP1S2P56377 157 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 ARHGAP8P85298 464 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 CDK3Q00526 305 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 CDC16Q13042 620 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 GTF2H2Q13888 395 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 UBAP2LQ14157 1087 aaKnown RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 FGL2Q14314 439 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 MLF2Q15773 248 aaPredicted RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 C18orf21Q32NC0 220 aaPredicted RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 ZNF658BQ4V348 819 aaPredicted RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TMEM259Q4ZIN3 620 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 KANK2Q63ZY3 851 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TBC1D3GQ6DHY5 549 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 NXNQ6DKJ4 435 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 TBC1D3CQ6IPX1 549 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 GTF2H2CQ6P1K8 395 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 ZNF852Q6ZMS4 543 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 GPRIN3Q6ZVF9 776 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 Q7L0L9 218 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 ASRGL1Q7L266 308 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 EFL1Q7Z2Z2 1120 aaKnown RBP8.71□□□□□ -1.02
CCDC47-207ENST00000612558 GOLGA7Q7Z5G4 137 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 HORMAD1Q86X24 394 aa8.71□□□□□ -1.02
CCDC47-207ENST00000612558 HOMEZQ8IX15 550 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms