RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CARD16Q5EG05 197 aa22.21■■□□□ 1.15
SRRM1-222ENST00000596378 ELMOD1Q8N336 334 aa22.21■■□□□ 1.15
SRRM1-222ENST00000596378 SLC13A3Q8WWT9 602 aa22.21■■□□□ 1.15
SRRM1-222ENST00000596378 TRIM43Q96BQ3 446 aaPredicted RBP22.21■■□□□ 1.15
SRRM1-222ENST00000596378 BEGAINQ9BUH8 593 aa22.21■■□□□ 1.15
SRRM1-222ENST00000596378 NTMT1Q9BV86 223 aa22.21■■□□□ 1.15
SRRM1-222ENST00000596378 TMEM45AQ9NWC5 275 aa22.21■■□□□ 1.15
SRRM1-222ENST00000596378 CHD7Q9P2D1 2997 aa22.21■■□□□ 1.15
SRRM1-222ENST00000596378 SLC25A13Q9UJS0 675 aa22.21■■□□□ 1.15
SRRM1-222ENST00000596378 H6PDO95479 791 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 CLIC3O95833 236 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 ANXA5P08758 320 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 EBLN1P0CF75 366 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 MSH3P20585 1137 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 BOP1Q14137 746 aaKnown RBP22.2■■□□□ 1.15
SRRM1-222ENST00000596378 AASDHQ4L235 1098 aaPredicted RBP22.2■■□□□ 1.15
SRRM1-222ENST00000596378 SPANXN4Q5MJ08 99 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 SERPINA13PQ6UXR4 307 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 UBE2R2Q712K3 238 aaPredicted RBP22.2■■□□□ 1.15
SRRM1-222ENST00000596378 ZFP28Q8NHY6 868 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 PYCR2Q96C36 320 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 RNF145Q96MT1 663 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 IKZF5Q9H5V7 419 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 LRTM1Q9HBL6 345 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 PNPLA3Q9NST1 481 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 TRPS1Q9UHF7 1281 aa22.2■■□□□ 1.15
SRRM1-222ENST00000596378 DYTNA2CJ06 578 aa22.2■■□□□ 1.14
SRRM1-222ENST00000596378 GRM6O15303 877 aa22.2■■□□□ 1.14
SRRM1-222ENST00000596378 GNPDA1P46926 289 aa22.2■■□□□ 1.14
SRRM1-222ENST00000596378 FXNQ16595 210 aa22.2■■□□□ 1.14
SRRM1-222ENST00000596378 LRRC26Q2I0M4 334 aa22.2■■□□□ 1.14
SRRM1-222ENST00000596378 CCDC149Q6ZUS6 474 aa22.2■■□□□ 1.14
SRRM1-222ENST00000596378 MFSD2AQ8NA29 543 aa22.2■■□□□ 1.14
SRRM1-222ENST00000596378 DGCR14Q96DF8 476 aaKnown RBP22.2■■□□□ 1.14
SRRM1-222ENST00000596378 C9orf16Q9BUW7 83 aa22.2■■□□□ 1.14
SRRM1-222ENST00000596378 ADI1Q9BV57 179 aa22.2■■□□□ 1.14
SRRM1-222ENST00000596378 BBS2Q9BXC9 721 aa22.2■■□□□ 1.14
SRRM1-222ENST00000596378 RBM38Q9H0Z9 239 aaKnown RBP22.2■■□□□ 1.14
SRRM1-222ENST00000596378 LINC00597Q9H2U6 94 aa22.2■■□□□ 1.14
SRRM1-222ENST00000596378 ACTR8Q9H981 624 aa22.2■■□□□ 1.14
SRRM1-222ENST00000596378 PPIL1Q9Y3C6 166 aa22.2■■□□□ 1.14
SRRM1-222ENST00000596378 H3BNH8 94 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 SLC28A1O00337 649 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 RFPL2O75678 378 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 LINC00271P0C7V0 271 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 SPINT3P49223 89 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 CDH15P55291 814 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 TEAD2Q15562 447 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 TRIM46Q7Z4K8 759 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 PACRGLQ8N7B6 248 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 ZFAND2BQ8WV99 257 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 SCAMP4Q969E2 229 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 RMND5BQ96G75 393 aaPredicted RBP22.19■■□□□ 1.14
SRRM1-222ENST00000596378 VPS50Q96JG6 964 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 NSMCE2Q96MF7 247 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 CHID1Q9BWS9 393 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 DPY30Q9C005 99 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 NDUFA13Q9P0J0 144 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 MYRFQ9Y2G1 1151 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 PCDHB3Q9Y5E6 796 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 COMMD3-BMI1R4GMX3 469 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 GRXCR2A6NFK2 248 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 HIDE1A8MVS5 230 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 KCNH1O95259 989 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 POP4O95707 220 aaKnown RBP22.19■■□□□ 1.14
SRRM1-222ENST00000596378 AKT1P31749 480 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 NEK2P51955 445 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 CREMQ03060 361 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 SPRED1Q7Z699 444 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 PROSER1Q86XN7 944 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 PAPD5Q8NDF8 572 aaKnown RBP22.19■■□□□ 1.14
SRRM1-222ENST00000596378 SORCS1Q8WY21 1168 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 GTF2H4Q92759 462 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 FBXL20Q96IG2 436 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 ZBTB18Q99592 522 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 ACPTQ9BZG2 426 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 SOX17Q9H6I2 414 aaPredicted RBP22.19■■□□□ 1.14
SRRM1-222ENST00000596378 FAM8A1Q9UBU6 413 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 MYO7AQ13402 2215 aa22.19■■□□□ 1.14
SRRM1-222ENST00000596378 RASAL1O95294 804 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 PDYNP01213 254 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 ADH1AP07327 375 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 PABPC1P11940 636 aaKnown RBP22.18■■□□□ 1.14
SRRM1-222ENST00000596378 FCGR1AP12314 374 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 AOAHP28039 575 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 MERTKQ12866 999 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 GTDC1Q4AE62 458 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.18■■□□□ 1.14
SRRM1-222ENST00000596378 C1orf53Q5VUE5 145 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 CYGBQ8WWM9 190 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 USP7Q93009 1102 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 ZNF583Q96ND8 569 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 CPEB1Q9BZB8 566 aaKnown RBP22.18■■□□□ 1.14
SRRM1-222ENST00000596378 CRISPLD2Q9H0B8 497 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 CDH23Q9H251 3354 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 SEC24DO94855 1032 aaPredicted RBP22.18■■□□□ 1.14
SRRM1-222ENST00000596378 CLDN9O95484 217 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 OR56A5P0C7T3 313 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 CBSLP0DN79 551 aa22.18■■□□□ 1.14
SRRM1-222ENST00000596378 NFKBIAP25963 317 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms