RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 MEI4A8MW99 385 aa30.29■■■□□ 2.44
CAPNS1-206ENST00000588815 SIX3O95343 332 aaPredicted RBP30.29■■■□□ 2.44
CAPNS1-206ENST00000588815 THEGLP0DJG4 465 aa30.29■■■□□ 2.44
CAPNS1-206ENST00000588815 IDSP22304 550 aa30.29■■■□□ 2.44
CAPNS1-206ENST00000588815 SRP54P61011 504 aaKnown RBP30.29■■■□□ 2.44
CAPNS1-206ENST00000588815 RACK1P63244 317 aaKnown RBP30.29■■■□□ 2.44
CAPNS1-206ENST00000588815 LSMEM2Q8N112 164 aa30.29■■■□□ 2.44
CAPNS1-206ENST00000588815 CCDC138Q96M89 665 aa30.29■■■□□ 2.44
CAPNS1-206ENST00000588815 AASDHPPTQ9NRN7 309 aa30.29■■■□□ 2.44
CAPNS1-206ENST00000588815 WWOXQ9NZC7 414 aa30.29■■■□□ 2.44
CAPNS1-206ENST00000588815 STK38LQ9Y2H1 464 aa30.29■■■□□ 2.44
CAPNS1-206ENST00000588815 PCM1Q15154 2024 aa30.29■■■□□ 2.44
CAPNS1-206ENST00000588815 SPAG17Q6Q759 2223 aa30.28■■■□□ 2.44
CAPNS1-206ENST00000588815 SPTY2D1-AS1A0A0U1RR47 76 aa30.28■■■□□ 2.44
CAPNS1-206ENST00000588815 ARHGEF33A8MVX0 844 aa30.28■■■□□ 2.44
CAPNS1-206ENST00000588815 C1orf105O95561 183 aa30.28■■■□□ 2.44
CAPNS1-206ENST00000588815 SLC35G4P0C7Q5 338 aa30.28■■■□□ 2.44
CAPNS1-206ENST00000588815 TDGF1P13385 188 aa30.28■■■□□ 2.44
CAPNS1-206ENST00000588815 CFAP61Q8NHU2 1237 aa30.28■■■□□ 2.44
CAPNS1-206ENST00000588815 ZNF483Q8TF39 744 aaPredicted RBP30.28■■■□□ 2.44
CAPNS1-206ENST00000588815 PDXPQ96GD0 296 aa30.28■■■□□ 2.44
CAPNS1-206ENST00000588815 PLCD4Q9BRC7 762 aa30.28■■■□□ 2.44
CAPNS1-206ENST00000588815 PCTPQ9UKL6 214 aa30.28■■■□□ 2.44
CAPNS1-206ENST00000588815 INVSQ9Y283 1065 aa30.28■■■□□ 2.44
CAPNS1-206ENST00000588815 SLCO1B7G3V0H7 640 aa30.27■■■□□ 2.44
CAPNS1-206ENST00000588815 MLYCDO95822 493 aa30.27■■■□□ 2.44
CAPNS1-206ENST00000588815 CLCQ05315 142 aa30.27■■■□□ 2.44
CAPNS1-206ENST00000588815 TPRG1LQ5T0D9 272 aa30.27■■■□□ 2.44
CAPNS1-206ENST00000588815 CACNA2D3Q8IZS8 1091 aa30.27■■■□□ 2.44
CAPNS1-206ENST00000588815 SLC22A18ASQ8N1D0 253 aa30.27■■■□□ 2.44
CAPNS1-206ENST00000588815 ANKS4BQ8N8V4 417 aa30.27■■■□□ 2.44
CAPNS1-206ENST00000588815 FBXL8Q96CD0 374 aa30.27■■■□□ 2.44
CAPNS1-206ENST00000588815 CD244Q9BZW8 370 aa30.27■■■□□ 2.44
CAPNS1-206ENST00000588815 ZDHHC5Q9C0B5 715 aa30.27■■■□□ 2.44
CAPNS1-206ENST00000588815 EIF2B4Q9UI10 523 aaKnown RBP30.27■■■□□ 2.44
CAPNS1-206ENST00000588815 TNRC6BQ9UPQ9 1833 aaKnown RBP30.27■■■□□ 2.44
CAPNS1-206ENST00000588815 E2F3O00716 465 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 TNFP01375 233 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 CHRNGP07510 517 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 CD38P28907 300 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 PIK3CGP48736 1102 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 RPL14P50914 215 aaKnown RBP30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 LCP2Q13094 533 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 CAPRIN2Q6IMN6 1127 aaKnown RBP30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 ATG14Q6ZNE5 492 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 LONP2Q86WA8 852 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 C1orf210Q8IVY1 113 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 HOMEZQ8IX15 550 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 AFAP1L2Q8N4X5 818 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 CCDC197Q8NCU1 140 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 DNASE2BQ8WZ79 361 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 SEC16BQ96JE7 1060 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 HSPA12BQ96MM6 686 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 SLC6A18Q96N87 628 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 NPHS2Q9NP85 383 aa30.26■■■□□ 2.44
CAPNS1-206ENST00000588815 TAPBPO15533 448 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 AGTR2P50052 363 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 BLKP51451 505 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 ALG11Q2TAA5 492 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 WASH2PQ6VEQ5 465 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 ZNF781Q8N8C0 355 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 TFGQ92734 400 aaPredicted RBP30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 SKA1Q96BD8 255 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 OSGEPL1Q9H4B0 414 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 WASH6PQ9NQA3 447 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 TDRD6O60522 2096 aaKnown RBP30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 GON4LQ3T8J9 2241 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 ARHGEF17Q96PE2 2063 aaPredicted RBP30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 RASGRP1O95267 797 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 DMWDQ09019 674 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 EEF1AKMT2Q5JPI9 291 aaKnown RBP30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 WDR45BQ5MNZ6 344 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 TSACCQ96A04 125 aaPredicted RBP30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 RAD51AP1Q96B01 352 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 MOCOSQ96EN8 888 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 FAR2Q96K12 515 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 TMEM79Q9BSE2 394 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 STN1Q9H668 368 aaKnown RBP30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 OPTCQ9UBM4 332 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 VTI1BQ9UEU0 232 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 KCNK6Q9Y257 313 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 ASF1AQ9Y294 204 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 ARL2BPQ9Y2Y0 163 aa30.25■■■□□ 2.43
CAPNS1-206ENST00000588815 MYO1CO00159 1063 aa30.24■■■□□ 2.43
CAPNS1-206ENST00000588815 STK16O75716 305 aa30.24■■■□□ 2.43
CAPNS1-206ENST00000588815 ALOX15P16050 662 aaPredicted RBP30.24■■■□□ 2.43
CAPNS1-206ENST00000588815 BCKDHBP21953 392 aa30.24■■■□□ 2.43
CAPNS1-206ENST00000588815 LRRC70Q7Z2Q7 622 aa30.24■■■□□ 2.43
CAPNS1-206ENST00000588815 CUZD1Q86UP6 607 aa30.24■■■□□ 2.43
CAPNS1-206ENST00000588815 DCUN1D3Q8IWE4 304 aa30.24■■■□□ 2.43
CAPNS1-206ENST00000588815 RMDN2Q96LZ7 410 aa30.24■■■□□ 2.43
CAPNS1-206ENST00000588815 WWP1Q9H0M0 922 aa30.24■■■□□ 2.43
CAPNS1-206ENST00000588815 SLC32A1Q9H598 525 aa30.24■■■□□ 2.43
CAPNS1-206ENST00000588815 KCNK4Q9NYG8 393 aa30.24■■■□□ 2.43
CAPNS1-206ENST00000588815 A0A1W2PR77 199 aa30.23■■■□□ 2.43
CAPNS1-206ENST00000588815 K7EPI3 171 aa30.23■■■□□ 2.43
CAPNS1-206ENST00000588815 HSPA7P48741 367 aa30.23■■■□□ 2.43
CAPNS1-206ENST00000588815 FNTBP49356 437 aa30.23■■■□□ 2.43
CAPNS1-206ENST00000588815 UAP1L1Q3KQV9 507 aa30.23■■■□□ 2.43
CAPNS1-206ENST00000588815 LPCAT2Q7L5N7 544 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms