RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 CSNK1DP48730 415 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 PTGR1Q14914 329 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 DNAJC14Q6Y2X3 702 aaPredicted RBP13.4□□□□□ -0.26
SRSF1-205ENST00000582730 MACC1Q6ZN28 852 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 KIAA2013Q8IYS2 634 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 SORCS1Q8WY21 1168 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 TMEM79Q9BSE2 394 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 OSBPL6Q9BZF3 934 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 CD244Q9BZW8 370 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 BRINP2Q9C0B6 783 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 BRD9Q9H8M2 597 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 ZIM2Q9NZV7 527 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 PAIP2BQ9ULR5 123 aaKnown RBP13.4□□□□□ -0.26
SRSF1-205ENST00000582730 TRBV5-4A0A0C4DH59 114 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 LSM1O15116 133 aaKnown RBP13.4□□□□□ -0.26
SRSF1-205ENST00000582730 EEDO75530 441 aaKnown RBP13.4□□□□□ -0.26
SRSF1-205ENST00000582730 PABPC1P11940 636 aaKnown RBP13.4□□□□□ -0.26
SRSF1-205ENST00000582730 HSD17B1P14061 328 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 EPB42P16452 691 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 CDH15P55291 814 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 ERVFC1P60507 584 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 TXNL4AP83876 142 aaKnown RBP13.4□□□□□ -0.26
SRSF1-205ENST00000582730 PTSQ03393 145 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 CPSF6Q16630 551 aaKnown RBP eCLIP13.4□□□□□ -0.26
SRSF1-205ENST00000582730 CARD16Q5EG05 197 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 DHRS4L2Q6PKH6 230 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 LINC00597Q9H2U6 94 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 SLC52A3Q9NQ40 469 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 ZDHHC3Q9NYG2 299 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 CNOT11Q9UKZ1 510 aaKnown RBP13.4□□□□□ -0.26
SRSF1-205ENST00000582730 PCDHA9Q9Y5H5 950 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 OBSL1O75147 1896 aa13.4□□□□□ -0.26
SRSF1-205ENST00000582730 LOC730098B7Z3J9 87 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 H3BNH8 94 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 RPIAP49247 311 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 MTPNP58546 118 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ANKDD1AQ495B1 522 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ZNF697Q5TEC3 545 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 SULT1C3Q6IMI6 304 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 NANOGP8Q6NSW7 305 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ELMSAN1Q6PJG2 1045 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ZNF513Q8N8E2 541 aaPredicted RBP13.39□□□□□ -0.27
SRSF1-205ENST00000582730 CLHC1Q8NHS4 586 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 GIPC3Q8TF64 312 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 CYB5D2Q8WUJ1 264 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 RHBDF1Q96CC6 855 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ZNF597Q96LX8 424 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 SEPHS2Q99611 448 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ACTR8Q9H981 624 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 NANOGQ9H9S0 305 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 OLAHQ9NV23 265 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 KCTD5Q9NXV2 234 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ZNF490Q9ULM2 529 aaPredicted RBP13.39□□□□□ -0.27
SRSF1-205ENST00000582730 MAFFQ9ULX9 164 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 MYRFQ9Y2G1 1151 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 KRT87PA6NCN2 255 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 K7EPI3 171 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ULK1O75385 1050 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 TFPTP0C1Z6 253 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 TYRP14679 529 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 GGT5P36269 586 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ZFP36L2P47974 494 aaKnown RBP13.39□□□□□ -0.27
SRSF1-205ENST00000582730 FOXM1Q08050 763 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 COQ5Q5HYK3 327 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 KRT80Q6KB66 452 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 LILRA6Q6PI73 481 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 CARM1Q86X55 608 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ZFAND4Q86XD8 727 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ACTR3BQ9P1U1 418 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 HS3ST2Q9Y278 367 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 AQP12BA6NM10 295 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 RGS14O43566 566 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 SEC22BO75396 215 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 STK16O75716 305 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 POP4O95707 220 aaKnown RBP13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ANXA5P08758 320 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 OR56A5P0C7T3 313 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 FUT4P22083 530 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 CCR7P32248 378 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 NTHL1P78549 312 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 EMX2Q04743 252 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 GRIK2Q13002 908 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 AQP12AQ8IXF9 295 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ZUFSPQ96AP4 578 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 PYCR2Q96C36 320 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 PPP3R2Q96LZ3 170 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 EMILIN2Q9BXX0 1053 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 CRISPLD2Q9H0B8 497 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 C11orf49Q9H6J7 331 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 ZNF232Q9UNY5 417 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 WNT6Q9Y6F9 365 aa13.39□□□□□ -0.27
SRSF1-205ENST00000582730 RNF103-CHMP3A0A140T963 221 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 FOXD2O60548 495 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-205ENST00000582730 EFCAB14O75071 495 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 RSL1D1O76021 490 aaKnown RBP13.38□□□□□ -0.27
SRSF1-205ENST00000582730 RPL10P27635 214 aaKnown RBP13.38□□□□□ -0.27
SRSF1-205ENST00000582730 NUP107P57740 925 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 LY6G5CQ5SRR4 150 aa13.38□□□□□ -0.27
SRSF1-205ENST00000582730 UBE2R2Q712K3 238 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-205ENST00000582730 ERMP1Q7Z2K6 904 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms