RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 HSD17B2P37059 387 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 CLCA4Q14CN2 919 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 NR0B2Q15466 257 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 C14orf28Q4W4Y0 310 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 CYHR1Q6ZMK1 362 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 UBE2R2Q712K3 238 aaPredicted RBP13.94□□□□□ -0.18
SKA2-205ENST00000580541 KANSL1Q7Z3B3 1105 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 TRABD2AQ86V40 505 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 VRK3Q8IV63 474 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 CYP4X1Q8N118 509 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 NAGSQ8N159 534 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 LILRA3Q8N6C8 439 aaPredicted RBP13.94□□□□□ -0.18
SKA2-205ENST00000580541 EID2Q8N6I1 236 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 OR5K2Q8NHB8 316 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 RHBDD1Q8TEB9 315 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 INSM2Q96T92 566 aaPredicted RBP13.94□□□□□ -0.18
SKA2-205ENST00000580541 CDC6Q99741 560 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 SLC12A9Q9BXP2 914 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 TFB2MQ9H5Q4 396 aaKnown RBP13.94□□□□□ -0.18
SKA2-205ENST00000580541 PARVBQ9HBI1 364 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 LNPEPQ9UIQ6 1025 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 WDR37Q9Y2I8 494 aa13.94□□□□□ -0.18
SKA2-205ENST00000580541 A0A1W2PPM1 405 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 C4orf47A7E2U8 309 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 RHPN2P1A8MT19 583 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 BTN3A1O00481 513 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 NUDT21O43809 227 aaKnown RBP13.93□□□□□ -0.18
SKA2-205ENST00000580541 GLRA3O75311 464 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 PSIP1O75475 530 aaKnown RBP13.93□□□□□ -0.18
SKA2-205ENST00000580541 WISP3O95389 354 aaPredicted RBP13.93□□□□□ -0.18
SKA2-205ENST00000580541 LDOC1O95751 146 aaPredicted RBP13.93□□□□□ -0.18
SKA2-205ENST00000580541 BRAFP15056 766 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 GLB1P16278 677 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 TGM1P22735 817 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 CRHR1P34998 444 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 FASLGP48023 281 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 CSRP3P50461 194 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 LIMK1P53667 647 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 AP1S2P56377 157 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 HHEXQ03014 270 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 ZNF460Q14592 562 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 HSP90B2PQ58FF3 399 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 PPM1JQ5JR12 505 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 AGBL2Q5U5Z8 902 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 TMEM207Q6UWW9 146 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 FRA10AC1Q70Z53 315 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 DCUN1D3Q8IWE4 304 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 SRRM1Q8IYB3 904 aaKnown RBP13.93□□□□□ -0.18
SKA2-205ENST00000580541 FBXO15Q8NCQ5 510 aaPredicted RBP13.93□□□□□ -0.18
SKA2-205ENST00000580541 GPR156Q8NFN8 814 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 OR2I1PQ8NGU4 316 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 RHEBL1Q8TAI7 183 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 MZB1Q8WU39 189 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 NAT6Q93015 286 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 KIAA1191Q96A73 305 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 SCYL1Q96KG9 808 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 RMDN2Q96LZ7 410 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 RAB11FIP5Q9BXF6 653 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 UCK1Q9HA47 277 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 TMBIM4Q9HC24 238 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 PARD6AQ9NPB6 346 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 PCMTD2Q9NV79 361 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 SIRPGQ9P1W8 387 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 TMCO1Q9UM00 188 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 PADI4Q9UM07 663 aa13.93□□□□□ -0.18
SKA2-205ENST00000580541 ARID1BQ8NFD5 2236 aaPredicted RBP13.92□□□□□ -0.18
SKA2-205ENST00000580541 EP300Q09472 2414 aaPredicted RBP13.92□□□□□ -0.18
SKA2-205ENST00000580541 TRBV23OR9-2A0A075B6M9 112 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 OR52A4PA6NMU1 304 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 GOLGA8RI6L899 631 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 SIGLEC6O43699 453 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 GFRA3O60609 400 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 C1orf105O95561 183 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 TSPAN12O95859 305 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 S100BP04271 92 aaPredicted RBP13.92□□□□□ -0.18
SKA2-205ENST00000580541 CD1DP15813 335 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 PNLIPP16233 465 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 SLC19A1P41440 591 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 GPR3P46089 330 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 DAB2P98082 770 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 SLC18A2Q05940 514 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 CCDC153Q494R4 210 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 CDKL4Q5MAI5 379 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 STPG1Q5TH74 334 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 KLHL35Q6PF15 583 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 ASCL5Q7RTU5 278 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 PIWIL4Q7Z3Z4 852 aaKnown RBP13.92□□□□□ -0.18
SKA2-205ENST00000580541 C17orf82Q86X59 251 aaPredicted RBP13.92□□□□□ -0.18
SKA2-205ENST00000580541 GPSM1Q86YR5 675 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 ARL14Q8N4G2 192 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 SLC37A2Q8TED4 501 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 KCTD4Q8WVF5 259 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 ANKRD49Q8WVL7 239 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 ATL1Q8WXF7 558 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 NXNL1Q96CM4 212 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 CCDC138Q96M89 665 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 SLC38A3Q99624 504 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 MRPL57Q9BQC6 102 aaKnown RBP13.92□□□□□ -0.18
SKA2-205ENST00000580541 EPB41L1Q9H4G0 881 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 KIR3DX1Q9H7L2 352 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms