RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 FAM86B1Q8N7N1 296 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 MFSD2AQ8NA29 543 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 PPP3R2Q96LZ3 170 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 NSMCE2Q96MF7 247 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 ZNF583Q96ND8 569 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 COPS8Q99627 209 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 DDX18Q9NVP1 670 aaKnown RBP17.19■□□□□ 0.34
ERBB2-205ENST00000578199 PDE10AQ9Y233 779 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 MAGED1Q9Y5V3 778 aaPredicted RBP17.19■□□□□ 0.34
ERBB2-205ENST00000578199 NEDD8-MDP1E9PL57 170 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 ARNTLO00327 626 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 B3GALT4O96024 378 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 JAK1P23458 1154 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 WDR5P61964 334 aaKnown RBP17.18■□□□□ 0.34
ERBB2-205ENST00000578199 ARHGEF6Q15052 776 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 GTDC1Q4AE62 458 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 AASDHQ4L235 1098 aaPredicted RBP17.18■□□□□ 0.34
ERBB2-205ENST00000578199 OTUD3Q5T2D3 398 aaPredicted RBP17.18■□□□□ 0.34
ERBB2-205ENST00000578199 TMEM214Q6NUQ4 689 aaKnown RBP17.18■□□□□ 0.34
ERBB2-205ENST00000578199 CBARPQ8N350 705 aaPredicted RBP17.18■□□□□ 0.34
ERBB2-205ENST00000578199 OR10A6Q8NH74 314 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 TCEAL4Q96EI5 215 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 LMLNQ96KR4 655 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 TBCDQ9BTW9 1192 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 THUMPD3Q9BV44 507 aaKnown RBP17.18■□□□□ 0.34
ERBB2-205ENST00000578199 SLC6A13Q9NSD5 602 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 EIF3LQ9Y262 564 aaKnown RBP17.18■□□□□ 0.34
ERBB2-205ENST00000578199 PLXNB3Q9ULL4 1909 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 ZNF106Q9H2Y7 1883 aaKnown RBP17.18■□□□□ 0.34
ERBB2-205ENST00000578199 AGAP14A8MT82 685 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 MANBAO00462 879 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 RASAL1O95294 804 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 ZNF23P17027 643 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 PCSK6P29122 969 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 GNPDA1P46926 289 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 RBBP5Q15291 538 aaKnown RBP17.18■□□□□ 0.34
ERBB2-205ENST00000578199 SPATS1Q496A3 300 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 MPP7Q5T2T1 576 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 LYPLAL1Q5VWZ2 237 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 SERPINA13PQ6UXR4 307 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 OTOP2Q7RTS6 562 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 SPRED1Q7Z699 444 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 GOLM1Q8NBJ4 401 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 SLC13A3Q8WWT9 602 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 FIG4Q92562 907 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 GTF2H4Q92759 462 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 BRD9Q9H8M2 597 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 CARS2Q9HA77 564 aaKnown RBP17.18■□□□□ 0.34
ERBB2-205ENST00000578199 ZDHHC3Q9NYG2 299 aa17.18■□□□□ 0.34
ERBB2-205ENST00000578199 KCNH1O95259 989 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 SNAP29O95721 258 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 C1SP09871 688 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 PRMT2P55345 433 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 BOP1Q14137 746 aaKnown RBP17.17■□□□□ 0.34
ERBB2-205ENST00000578199 MAPKAPK3Q16644 382 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 SLC36A3Q495N2 470 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 TMTC4Q5T4D3 741 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 ZNF648Q5T619 568 aaPredicted RBP17.17■□□□□ 0.34
ERBB2-205ENST00000578199 UBE2R2Q712K3 238 aaPredicted RBP17.17■□□□□ 0.34
ERBB2-205ENST00000578199 PROSER1Q86XN7 944 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 TBC1D21Q8IYX1 336 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 PHACTR4Q8IZ21 702 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 RNF175Q8N4F7 328 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 PAPD5Q8NDF8 572 aaKnown RBP17.17■□□□□ 0.34
ERBB2-205ENST00000578199 SCAMP4Q969E2 229 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 LYSMD1Q96S90 227 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 NTMT1Q9BV86 223 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 DPY30Q9C005 99 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 LINC00597Q9H2U6 94 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 ACTR8Q9H981 624 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 LRTM1Q9HBL6 345 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 VCX3AQ9NNX9 186 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 KCTD5Q9NXV2 234 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 SLC25A37Q9NYZ2 338 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 B4GALT6Q9UBX8 382 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.17■□□□□ 0.34
ERBB2-205ENST00000578199 UTS2RQ9UKP6 389 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 PCDHB3Q9Y5E6 796 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 CEPT1Q9Y6K0 416 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 MYO7AQ13402 2215 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 LDLRP01130 860 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 NPPAP01160 153 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 PDYNP01213 254 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 ANXA5P08758 320 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 EBLN1P0CF75 366 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 TTLL9Q3SXZ7 439 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 TTC33Q6PID6 262 aaPredicted RBP17.17■□□□□ 0.34
ERBB2-205ENST00000578199 USP45Q70EL2 814 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 PACRGLQ8N7B6 248 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 BEND7Q8N7W2 519 aaPredicted RBP17.17■□□□□ 0.34
ERBB2-205ENST00000578199 ECHDC3Q96DC8 303 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 MUC13Q9H3R2 512 aa17.17■□□□□ 0.34
ERBB2-205ENST00000578199 CLK4Q9HAZ1 481 aaKnown RBP17.17■□□□□ 0.34
ERBB2-205ENST00000578199 KANSL1LA0AUZ9 987 aa17.16■□□□□ 0.34
ERBB2-205ENST00000578199 AREL1O15033 823 aa17.16■□□□□ 0.34
ERBB2-205ENST00000578199 CXCL14O95715 111 aa17.16■□□□□ 0.34
ERBB2-205ENST00000578199 PLCL1Q15111 1095 aa17.16■□□□□ 0.34
ERBB2-205ENST00000578199 ZIK1Q3SY52 487 aaPredicted RBP17.16■□□□□ 0.34
ERBB2-205ENST00000578199 TRIM46Q7Z4K8 759 aa17.16■□□□□ 0.34
ERBB2-205ENST00000578199 MSRB3Q8IXL7 192 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms