RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 SLC26A3P40879 764 aa18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 HSPA14Q0VDF9 509 aa18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 KRT33BQ14525 404 aa18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 RASA2Q15283 850 aa18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 FAM153CQ494X1 144 aa18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 KLHL35Q6PF15 583 aa18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 C17orf82Q86X59 251 aaPredicted RBP18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 NKAPQ8N5F7 415 aaKnown RBP18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 ZNF248Q8NDW4 579 aa18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 MYRIPQ8NFW9 859 aa18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 SLC44A1Q8WWI5 657 aa18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 APOLD1Q96LR9 279 aa18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 GPR22Q99680 433 aa18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 DPYSL5Q9BPU6 564 aa18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 SLC23A2Q9UGH3 650 aa18.46■□□□□ 0.55
SYNGR3-203ENST00000563869 TENM4Q6N022 2769 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 IQANK1A0A1B0GTG1 560 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 A6NCN8 305 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 RHPN2P1A8MT19 583 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 B4DGG1 531 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 J3QKU1 62 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 CTIFO43310 598 aaKnown RBP18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 SIGLEC6O43699 453 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 MT-CO3P00414 261 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 NUDT17P0C025 328 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 MYBL2P10244 700 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 STMN1P16949 149 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 CRABP2P29373 138 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 CCR7P32248 378 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 EPHA4P54764 986 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 IL2P60568 153 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 SLC29A2Q14542 456 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 ZNF658BQ4V348 819 aaPredicted RBP18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 HECTD2Q5U5R9 776 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 RIBC1Q8N443 379 aaPredicted RBP18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 CCL4L1Q8NHW4 92 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 WBP1Q96G27 269 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 ELMO2Q96JJ3 720 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 CABS1Q96KC9 395 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 PAFAH2Q99487 392 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 MCMBPQ9BTE3 642 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 RAB11FIP5Q9BXF6 653 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 OR52A5Q9H2C5 316 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 PADI4Q9UM07 663 aa18.45■□□□□ 0.54
SYNGR3-203ENST00000563869 EME2A4GXA9 379 aaPredicted RBP18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 TRIM38O00635 465 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 NIPSNAP2O75323 286 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 TCEA3O75764 348 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 C1QAP02745 245 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 ITGA2BP08514 1039 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 GIMD1P0DJR0 217 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 MPC1LP0DKB6 136 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 MTHFD1P11586 935 aaKnown RBP18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 FDXRP22570 491 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 GABRB3P28472 473 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 CLCN7P51798 805 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 HHEXQ03014 270 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 SP140Q13342 867 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 TAF1BQ53T94 588 aaPredicted RBP18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 KCTD16Q68DU8 428 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 CAPRIN2Q6IMN6 1127 aaKnown RBP18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 LCA5Q86VQ0 697 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 TBC1D21Q8IYX1 336 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 NAGSQ8N159 534 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 C12orf66Q96MD2 445 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 ZNF578Q96N58 590 aaPredicted RBP18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 ROPN1BQ9BZX4 212 aaPredicted RBP18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 TRIT1Q9H3H1 467 aaKnown RBP18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 ROPN1Q9HAT0 212 aaPredicted RBP18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 PRDM8Q9NQV8 689 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 PSMC3IPQ9P2W1 217 aaPredicted RBP18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 CPNE7Q9UBL6 633 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 GULP1Q9UBP9 304 aa18.44■□□□□ 0.54
SYNGR3-203ENST00000563869 NOBOXO60393 691 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 CDH16O75309 829 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 RPL10P27635 214 aaKnown RBP18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 SERPINB8P50452 374 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 UCNP55089 124 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 PCBP4P57723 403 aaKnown RBP18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 GPLD1P80108 840 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 RHDQ02161 417 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 IFFO1Q0D2I5 559 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 GBX1Q14549 363 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 USP10Q14694 798 aaKnown RBP18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 UAP1Q16222 522 aaPredicted RBP18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 ZNF789Q5FWF6 425 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 ZNF549Q6P9A3 640 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 GSPT2Q8IYD1 628 aaKnown RBP18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 MYO1HQ8N1T3 1032 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 ARL14Q8N4G2 192 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 SKA2Q8WVK7 121 aaPredicted RBP18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 TFGQ92734 400 aaPredicted RBP18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 PDLIM5Q96HC4 596 aaKnown RBP18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 GPR21Q99679 349 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 WWP1Q9H0M0 922 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 SMYD2Q9NRG4 433 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 PCYT1BQ9Y5K3 369 aaPredicted RBP18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 PSAT1Q9Y617 370 aa18.43■□□□□ 0.54
SYNGR3-203ENST00000563869 MGAQ8IWI9 3026 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 LILRA5A6NI73 299 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms