RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 PRDM8Q9NQV8 689 aa16.05■□□□□ 0.16
PCNX4-213ENST00000556907 POT1Q9NUX5 634 aa16.05■□□□□ 0.16
PCNX4-213ENST00000556907 TAS2R13Q9NYV9 303 aa16.05■□□□□ 0.16
PCNX4-213ENST00000556907 SIRPGQ9P1W8 387 aa16.05■□□□□ 0.16
PCNX4-213ENST00000556907 HEBP2Q9Y5Z4 205 aa16.05■□□□□ 0.16
PCNX4-213ENST00000556907 U3KQA8 63 aa16.05■□□□□ 0.16
PCNX4-213ENST00000556907 CNOT1A5YKK6 2376 aaKnown RBP16.05■□□□□ 0.16
PCNX4-213ENST00000556907 DCDC2BA2VCK2 349 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 IFRD1O00458 451 aaPredicted RBP16.04■□□□□ 0.16
PCNX4-213ENST00000556907 TM9SF1O15321 606 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 NIPSNAP2O75323 286 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 SPAG7O75391 227 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 RFPL3O75679 317 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 DKK1O94907 266 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 ZWINTO95229 277 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 COL6A2P12110 1019 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 ZNF37AP17032 561 aaPredicted RBP16.04■□□□□ 0.16
PCNX4-213ENST00000556907 NDUFS1P28331 727 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 CRHR1P34998 444 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 SLC26A3P40879 764 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 SIM1P81133 766 aaPredicted RBP16.04■□□□□ 0.16
PCNX4-213ENST00000556907 ZNF460Q14592 562 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 NR1D2Q14995 579 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 SYTL3Q4VX76 610 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 PLEKHS1Q5SXH7 462 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 UGT3A1Q6NUS8 523 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 FAM83HQ6ZRV2 1179 aaPredicted RBP16.04■□□□□ 0.16
PCNX4-213ENST00000556907 OTOAQ7RTW8 1153 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 ZNF438Q7Z4V0 828 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 PIM3Q86V86 326 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 TMEM159Q96B96 161 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 VPS11Q9H270 941 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 LRIT1Q9P2V4 623 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 CPNE7Q9UBL6 633 aa16.04■□□□□ 0.16
PCNX4-213ENST00000556907 SLC5A10A0PJK1 596 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 CPED1A4D0V7 1026 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 RHPN2P1A8MT19 583 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 E5RI56 91 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 GPC4O75487 556 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 VIPP01282 170 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 CHRM3P20309 590 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 SAT1P21673 171 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 RPL10P27635 214 aaKnown RBP16.03■□□□□ 0.16
PCNX4-213ENST00000556907 AOAHP28039 575 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 CCR7P32248 378 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 SKIV2L2P42285 1042 aaKnown RBP16.03■□□□□ 0.16
PCNX4-213ENST00000556907 IRF9Q00978 393 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 HHEXQ03014 270 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 PDAP1Q13442 181 aaKnown RBP16.03■□□□□ 0.16
PCNX4-213ENST00000556907 CLPPQ16740 277 aaPredicted RBP16.03■□□□□ 0.16
PCNX4-213ENST00000556907 TSNAXIP1Q2TAA8 658 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 TTLL9Q3SXZ7 439 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.03■□□□□ 0.16
PCNX4-213ENST00000556907 CAPRIN2Q6IMN6 1127 aaKnown RBP16.03■□□□□ 0.16
PCNX4-213ENST00000556907 RAPH1Q70E73 1250 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 EFL1Q7Z2Z2 1120 aaKnown RBP16.03■□□□□ 0.16
PCNX4-213ENST00000556907 TRIM48Q8IWZ4 208 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 CENPLQ8N0S6 344 aaPredicted RBP16.03■□□□□ 0.16
PCNX4-213ENST00000556907 IFI44Q8TCB0 444 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 LKAAEAR1Q8TD35 194 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 CD200R1Q8TD46 325 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 SLC37A2Q8TED4 501 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 CXorf40BQ96DE9 158 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 GPR21Q99679 349 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 IQCGQ9H095 443 aaKnown RBP16.03■□□□□ 0.16
PCNX4-213ENST00000556907 EPB41L1Q9H4G0 881 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 GPAMQ9HCL2 828 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 TOR4AQ9NXH8 423 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 DCDC2Q9UHG0 476 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 TLK1Q9UKI8 766 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 ACOT9Q9Y305 439 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 COLEC10Q9Y6Z7 277 aa16.03■□□□□ 0.16
PCNX4-213ENST00000556907 SPAARA0A1B0GVQ0 90 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 SLCO2B1O94956 709 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 EML2O95834 649 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 FTH1P19P0C7X4 201 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 SLC19A1P41440 591 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 CCT5P48643 541 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 CLCN7P51798 805 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 KPNA2P52292 529 aaKnown RBP16.02■□□□□ 0.16
PCNX4-213ENST00000556907 UBE2IP63279 158 aaKnown RBP16.02■□□□□ 0.16
PCNX4-213ENST00000556907 CLCA4Q14CN2 919 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 SEPT7Q16181 437 aaKnown RBP16.02■□□□□ 0.16
PCNX4-213ENST00000556907 PPM1JQ5JR12 505 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 GUSBP11Q6P575 273 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 CDHR3Q6ZTQ4 885 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 TBC1D1Q86TI0 1168 aaPredicted RBP16.02■□□□□ 0.16
PCNX4-213ENST00000556907 GIMAP7Q8NHV1 300 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 TCP10LQ8TDR4 215 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 DENND1AQ8TEH3 1009 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 UBXN10Q96LJ8 280 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 TSNARE1Q96NA8 513 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 WWP1Q9H0M0 922 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 OR52A5Q9H2C5 316 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 KCNK9Q9NPC2 374 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 NKIRAS1Q9NYS0 192 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 TRMT6Q9UJA5 497 aaKnown RBP16.02■□□□□ 0.16
PCNX4-213ENST00000556907 WDR37Q9Y2I8 494 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 RNF215Q9Y6U7 377 aa16.02■□□□□ 0.16
PCNX4-213ENST00000556907 IQCF5A8MTL0 148 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms