RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	FEM1A	Q9BSK4	669 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	LIN28A	Q9H9Z2	209 aa	Known RBP	12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	TMEM138	Q9NPI0	162 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	ZNF222	Q9UK12	451 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	RAB23	Q9ULC3	237 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029		A0A1B0GTW7	788 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029		H0YJX3	145 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	IGSF6	O95976	241 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	S1PR4	O95977	384 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	POU2F1	P14859	743 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	CLCN2	P51788	898 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	ADAM17	P78536	824 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	CBX3	Q13185	183 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	PYDC2	Q56P42	97 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	FAM171B	Q6P995	826 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	ISCA2	Q86U28	154 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	ANKRD46	Q86W74	232 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	CDK20	Q8IZL9	346 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	PHF10	Q8WUB8	498 aa	Known RBP	12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	IPCEF1	Q8WWN9	437 aa	Predicted RBP	12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	RANBP9	Q96S59	729 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	RTP3	Q9BQQ7	232 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	GINS4	Q9BRT9	223 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	TMEM181	Q9P2C4	612 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	LEF1	Q9UJU2	399 aa	Predicted RBP	12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	ARL5A	Q9Y689	179 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	SESN1	Q9Y6P5	492 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029		A0A1W2PRU2	124 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	LRRC14B	A6NHZ5	514 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	OR10H3	O60404	316 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	NOS1AP	O75052	506 aa	Predicted RBP	12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	HAPLN1	P10915	354 aa	Predicted RBP	12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	LGALS3BP	Q08380	585 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	ACOX1	Q15067	660 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	CRTC3	Q6UUV7	619 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	GPR65	Q8IYL9	337 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	FAM9C	Q8IZT9	166 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	TMIGD2	Q96BF3	282 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	C1GALT1C1	Q96EU7	318 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	C3orf30	Q96M34	536 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	KCNA7	Q96RP8	456 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	RPRD1B	Q9NQG5	326 aa	Known RBP	12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	PTGFRN	Q9P2B2	879 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	RNF11	Q9Y3C5	154 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	TCRBV3S1	A0A5B6	114 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	HAS3	O00219	553 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	UBFD1	O14562	309 aa	Known RBP	12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	GLUD1	P00367	558 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	COL6A1	P12109	1028 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	UGT1A6	P19224	532 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	ACADVL	P49748	655 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	CSRP3	P50461	194 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	INHBC	P55103	352 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	TNK2	Q07912	1038 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	BNIP2	Q12982	314 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	ERMP1	Q7Z2K6	904 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	GPR180	Q86V85	440 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	SMYD1	Q8NB12	490 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	FAM126A	Q9BYI3	521 aa	Predicted RBP	12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	ADGRE2	Q9UHX3	823 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	PAPPA2	Q9BXP8	1791 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	ANKRD33B	A6NCL7	494 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029		H3BNH8	94 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	SOCS2	O14508	198 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	TPD52L2	O43399	206 aa	Known RBP	12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	NDST2	P52849	883 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	SH3BP2	P78314	561 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	TXNL4A	P83876	142 aa	Known RBP	12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	GLYAT	Q6IB77	296 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	LARP4	Q71RC2	724 aa	Known RBP eCLIP	12.07	□□□□□ -0.48	1e-6	■□□□□ 8.9
TMPO-212	ENST00000556029	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	FAM20C	Q8IXL6	584 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	SLC34A3	Q8N130	599 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	OR13J1	Q8NGT2	312 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	UBXN10	Q96LJ8	280 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	CXorf21	Q9HAI6	301 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	PREB	Q9HCU5	417 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	RPS6KB2	Q9UBS0	482 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	DNAJC15	Q9Y5T4	150 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	SQOR	Q9Y6N5	450 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	MTMR11	A4FU01	709 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	RFXANK	O14593	260 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	SNAP91	O60641	907 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	PAPSS2	O95340	614 aa	Predicted RBP	12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	MAPK9	P45984	424 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	KCNC1	P48547	511 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	CASP9	P55211	416 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	GALNT1	Q10472	559 aa	Predicted RBP	12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	APOF	Q13790	326 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	GRB7	Q14451	532 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	KLHL12	Q53G59	568 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	PIK3R6	Q5UE93	754 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	OR4L1	Q8NH43	312 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	PTER	Q96BW5	349 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	MCUB	Q9NWR8	336 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	ANGPT4	Q9Y264	503 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	TBC1D3B	A6NDS4	549 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	PPP6C	O00743	305 aa		12.07	□□□□□ -0.48
TMPO-212	ENST00000556029	CDK14	O94921	469 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms