RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 RMDN2Q96LZ7 410 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 ZDHHC5Q9C0B5 715 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 WWP1Q9H0M0 922 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 TMEM168Q9H0V1 697 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 C11orf16Q9NQ32 467 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 NCKIPSDQ9NZQ3 722 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 SPASTQ9UBP0 616 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 APOBEC3BQ9UH17 382 aaKnown RBP16.98■□□□□ 0.31
LETMD1-220ENST00000549686 PDE10AQ9Y233 779 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 ASF1AQ9Y294 204 aa16.98■□□□□ 0.31
LETMD1-220ENST00000549686 FAM86C2PA6NEL3 165 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 OR5K4A6NMS3 321 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 TMEM114B3SHH9 223 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 KDM1AO60341 852 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 C1orf105O95561 183 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 IMPDH1P20839 514 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 NDUFS1P28331 727 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 CSNK1EP49674 416 aaKnown RBP16.97■□□□□ 0.31
LETMD1-220ENST00000549686 HERVK_113P63132 956 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 GNGT1P63211 74 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 SETDB1Q15047 1291 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 CHI3L2Q15782 390 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 PHKG1Q16816 387 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 ZC3H14Q6PJT7 736 aaKnown RBP16.97■□□□□ 0.31
LETMD1-220ENST00000549686 TBC1D21Q8IYX1 336 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 PTGR2Q8N8N7 351 aaPredicted RBP16.97■□□□□ 0.31
LETMD1-220ENST00000549686 PHC3Q8NDX5 983 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 CFAP61Q8NHU2 1237 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 ZNF75CPQ92670 426 aaPredicted RBP16.97■□□□□ 0.31
LETMD1-220ENST00000549686 DLG3Q92796 817 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 RAD51AP1Q96B01 352 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 L3HYPDHQ96EM0 354 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 CCDC138Q96M89 665 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 EGFL8Q99944 293 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 TRMOQ9BU70 441 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 MECRQ9BV79 373 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 C1QTNF3Q9BXJ4 246 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 ERVK-6Q9BXR3 956 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 TRIT1Q9H3H1 467 aaKnown RBP16.97■□□□□ 0.31
LETMD1-220ENST00000549686 MVB12BQ9H7P6 319 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 ARL15Q9NXU5 204 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 POLG2Q9UHN1 485 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 PNMA8BQ9ULN7 279 aaPredicted RBP16.97■□□□□ 0.31
LETMD1-220ENST00000549686 PLEKHM1Q9Y4G2 1056 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 EML5Q05BV3 1969 aa16.97■□□□□ 0.31
LETMD1-220ENST00000549686 ARHGEF33A8MVX0 844 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 MYO1CO00159 1063 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 SHOX2O60902 331 aaPredicted RBP16.96■□□□□ 0.31
LETMD1-220ENST00000549686 FGF3P11487 239 aaPredicted RBP16.96■□□□□ 0.31
LETMD1-220ENST00000549686 BGNP21810 368 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 LSP1P33241 339 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 HSD17B2P37059 387 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 CTSKP43235 329 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 STX3Q13277 289 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 PFKFB4Q16877 469 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 DUOXA1Q1HG43 343 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 CFAP157Q5JU67 520 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 GKN2Q86XP6 184 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 RAB42Q8N4Z0 105 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 AVL9Q8NBF6 648 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 OR6Y1Q8NGX8 325 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 OR5K2Q8NHB8 316 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 UBTD2Q8WUN7 234 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 FBXL8Q96CD0 374 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 PRRX2Q99811 253 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 COL25A1Q9BXS0 654 aaPredicted RBP16.96■□□□□ 0.31
LETMD1-220ENST00000549686 UTP6Q9NYH9 597 aaKnown RBP16.96■□□□□ 0.31
LETMD1-220ENST00000549686 COLEC10Q9Y6Z7 277 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 MUC3AQ02505 3323 aa16.96■□□□□ 0.31
LETMD1-220ENST00000549686 NEMP2A6NFY4 417 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 ZNF839A8K0R7 811 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 DFNA5O60443 496 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 NPHS1O60500 1241 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 F3P13726 295 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 AK4P27144 223 aaPredicted RBP16.95■□□□□ 0.3
LETMD1-220ENST00000549686 RPL10P27635 214 aaKnown RBP16.95■□□□□ 0.3
LETMD1-220ENST00000549686 GGT5P36269 586 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 PCBP2Q15366 365 aaKnown RBP eCLIP16.95■□□□□ 0.3
LETMD1-220ENST00000549686 SLC30A9Q6PML9 568 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 LAYNQ6UX15 382 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 TAF8Q7Z7C8 310 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 NRROSQ86YC3 692 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 KIRREL3Q8IZU9 778 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 PIGKQ92643 395 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 RHBDF1Q96CC6 855 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 PHF21BQ96EK2 531 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 CNDP1Q96KN2 507 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 C12orf66Q96MD2 445 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 LRRC61Q9BV99 259 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 GATA5Q9BWX5 397 aaPredicted RBP16.95■□□□□ 0.3
LETMD1-220ENST00000549686 PRDM8Q9NQV8 689 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 THAP1Q9NVV9 213 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 WWOXQ9NZC7 414 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 TAAR2Q9P1P5 351 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 TBC1D29Q9UFV1 150 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 KLF15Q9UIH9 416 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 PTBP2Q9UKA9 531 aaKnown RBP16.95■□□□□ 0.3
LETMD1-220ENST00000549686 PSMD13Q9UNM6 376 aa16.95■□□□□ 0.3
LETMD1-220ENST00000549686 ABCA7Q8IZY2 2146 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 KIR2DS5A0A0G2JLQ3 304 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms