RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 FAM174BQ3ZCQ3 159 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 RFTN2Q52LD8 501 aaPredicted RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 MORN1Q5T089 497 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 CACHD1Q5VU97 1274 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 PSAPL1Q6NUJ1 521 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 LRRC8DQ7L1W4 858 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 LACC1Q8IV20 430 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 MSRB3Q8IXL7 192 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 HS3ST5Q8IZT8 346 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 CADM3Q8N126 398 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 MDGA1Q8NFP4 955 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 BRI3BPQ8WY22 251 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 ESAMQ96AP7 390 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 RMDN1Q96DB5 314 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 CINPQ9BW66 212 aaPredicted RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 DPY30Q9C005 99 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 EPS8L2Q9H6S3 715 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 KAT8Q9H7Z6 458 aaKnown RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 SCN3BQ9NY72 215 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 SLC25A37Q9NYZ2 338 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 MARCH2Q9P0N8 246 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 DNMT3BQ9UBC3 853 aaKnown RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 INVSQ9Y283 1065 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 PCDHB1Q9Y5F3 818 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 PCNTO95613 3336 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 A0A0U1RQF3 1178 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 ISPDA4D126 451 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 PTGES3LE9PB15 166 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 ARHGEF15O94989 841 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 OAZ2O95190 189 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 NADKO95544 446 aaPredicted RBP8.58□□□□□ -1.04
TDP1-204ENST00000545686 ITGB1P05556 798 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 PGRP06401 933 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 BMP4P12644 408 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 SLC2A4P14672 509 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 IGFBP5P24593 272 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 ARL1P40616 181 aaPredicted RBP8.58□□□□□ -1.04
TDP1-204ENST00000545686 ST13P50502 369 aaKnown RBP8.58□□□□□ -1.04
TDP1-204ENST00000545686 CLCN7P51798 805 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 KPNA1P52294 538 aaPredicted RBP8.58□□□□□ -1.04
TDP1-204ENST00000545686 IL5RAQ01344 420 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 CACNB2Q08289 660 aaPredicted RBP8.58□□□□□ -1.04
TDP1-204ENST00000545686 CDC20Q12834 499 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 FADDQ13158 208 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 INAQ16352 499 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 LRIF1Q5T3J3 769 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 TMEM53Q6P2H8 277 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 SBSNQ6UWP8 590 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 TMEM179BQ7Z7N9 219 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 ADCK1Q86TW2 530 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 CIR1Q86X95 450 aaPredicted RBP8.58□□□□□ -1.04
TDP1-204ENST00000545686 PIANPQ8IYJ0 282 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 CHPFQ8IZ52 775 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 DCBLD1Q8N8Z6 715 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 TRIB2Q92519 343 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 NCLNQ969V3 563 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 APOL4Q9BPW4 351 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 SGIP1Q9BQI5 828 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 HEPHQ9BQS7 1158 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 ASPSCR1Q9BZE9 553 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 CCDC90BQ9GZT6 254 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 P2RY12Q9H244 342 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 IKZF5Q9H5V7 419 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 SP140LQ9H930 580 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 LTB4R2Q9NPC1 389 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 HECAQ9UBI9 543 aaPredicted RBP8.58□□□□□ -1.04
TDP1-204ENST00000545686 UBA2Q9UBT2 640 aaPredicted RBP8.58□□□□□ -1.04
TDP1-204ENST00000545686 MAN2B2Q9Y2E5 1009 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 DHRS7Q9Y394 339 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 PCDHGA10Q9Y5H3 936 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 A0A096LPI6 279 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 F5H5T6 163 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 TACR2P21452 398 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 CD40LGP29965 261 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 LAPTM5Q13571 262 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 RAPSNQ13702 412 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 DSC3Q14574 896 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 PTGR1Q14914 329 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 PERM1Q5SV97 790 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 CPZQ66K79 652 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 DET1Q7L5Y6 550 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 TRIM46Q7Z4K8 759 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 MILR1Q7Z6M3 343 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 B3GNT8Q7Z7M8 397 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 FAM9CQ8IZT9 166 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 ZNF513Q8N8E2 541 aaPredicted RBP8.58□□□□□ -1.04
TDP1-204ENST00000545686 NDNFQ8TB73 568 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 UBTD2Q8WUN7 234 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 GLMNQ92990 594 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 PYURFQ96I23 114 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 CPPED1Q9BRF8 314 aaPredicted RBP8.58□□□□□ -1.04
TDP1-204ENST00000545686 IPPKQ9H8X2 491 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 SPC25Q9HBM1 224 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 CPNE5Q9HCH3 593 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 TLR8Q9NR97 1041 aaKnown RBP8.58□□□□□ -1.04
TDP1-204ENST00000545686 C1orf109Q9NX04 203 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 ANKMY1Q9P2S6 941 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 TRPS1Q9UHF7 1281 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 FKBPLQ9UIM3 349 aa8.58□□□□□ -1.04
TDP1-204ENST00000545686 UTS2RQ9UKP6 389 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms