RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 TAAR8Q969N4 342 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 FAM162AQ96A26 154 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 SYAP1Q96A49 352 aaPredicted RBP3.4□□□□□ -1.87
LEMD3-204ENST00000542032 FAM149B1Q96BN6 582 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 PGAM5Q96HS1 289 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 VPS39Q96JC1 886 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 DGAT2Q96PD7 388 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 ZNF696Q9H7X3 374 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 SEBOXQ9HB31 216 aaPredicted RBP3.4□□□□□ -1.87
LEMD3-204ENST00000542032 MID1IP1Q9NPA3 183 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 RRP7BPQ9NSQ0 103 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 SETD4Q9NVD3 440 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 TAAR2Q9P1P5 351 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 ABI3Q9P2A4 366 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 SEC63Q9UGP8 760 aaKnown RBP3.4□□□□□ -1.87
LEMD3-204ENST00000542032 HOOK1Q9UJC3 728 aaKnown RBP3.4□□□□□ -1.87
LEMD3-204ENST00000542032 ANAPC2Q9UJX6 822 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 AAR2Q9Y312 384 aaKnown RBP3.4□□□□□ -1.87
LEMD3-204ENST00000542032 SESN1Q9Y6P5 492 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 PTPRCP08575 1304 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 KIF26BQ2KJY2 2108 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 RGSL1A5PLK6 1076 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 DNM1LO00429 736 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 VCYO14598 125 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 PGRMC2O15173 223 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 SPINT2O43291 252 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 HEXBP07686 556 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 CCDC175P0C221 793 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 SFTPCP11686 197 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 GM2AP17900 193 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 NR1D1P20393 614 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 IL4RP24394 825 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 HOXC9P31274 260 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 GNL1P36915 607 aaPredicted RBP3.39□□□□□ -1.87
LEMD3-204ENST00000542032 APOBEC1P41238 236 aaKnown RBP3.39□□□□□ -1.87
LEMD3-204ENST00000542032 MTHFRP42898 656 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 PIP4K2AP48426 406 aaPredicted RBP3.39□□□□□ -1.87
LEMD3-204ENST00000542032 AMPHP49418 695 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 SUOXP51687 545 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 F2RL1P55085 397 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 ISL1P61371 349 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 CSTF3Q12996 717 aaKnown RBP3.39□□□□□ -1.87
LEMD3-204ENST00000542032 GRIK2Q13002 908 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 GAGE5Q13069 117 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 GAGE6Q13070 117 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 OLIG2Q13516 323 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 ALCAMQ13740 583 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 BAATQ14032 418 aaPredicted RBP3.39□□□□□ -1.87
LEMD3-204ENST00000542032 MORF4L2Q15014 288 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 COL28A1Q2UY09 1125 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 DPCR1Q3MIW9 517 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 IGSF11Q5DX21 431 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 CXorf66Q5JRM2 361 aaPredicted RBP3.39□□□□□ -1.87
LEMD3-204ENST00000542032 TSSK4Q6SA08 328 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 OLFM4Q6UX06 510 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 OTUD6AQ7L8S5 288 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 CACNA2D4Q7Z3S7 1137 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 RNF168Q8IYW5 571 aaPredicted RBP3.39□□□□□ -1.87
LEMD3-204ENST00000542032 TMEM255BQ8WV15 326 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 ZFAND2BQ8WV99 257 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 KCNE4Q8WWG9 221 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 CTNNBL1Q8WYA6 563 aaPredicted RBP3.39□□□□□ -1.87
LEMD3-204ENST00000542032 GTF3C6Q969F1 213 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 SMARCE1Q969G3 411 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 IGSF8Q969P0 613 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 ORAI1Q96D31 301 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 FBXO17Q96EF6 278 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 ELMOD3Q96FG2 381 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 CCDC114Q96M63 670 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 QRFPRQ96P65 431 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 ACOX2Q99424 681 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 TMEM47Q9BQJ4 181 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 SPXQ9BT56 116 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 CCDC106Q9BWC9 280 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 PFDN4Q9NQP4 134 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 ACSS1Q9NUB1 689 aaPredicted RBP3.39□□□□□ -1.87
LEMD3-204ENST00000542032 ACTR3BQ9P1U1 418 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 KIF3AQ9Y496 699 aa3.39□□□□□ -1.87
LEMD3-204ENST00000542032 LOC102723996A0A087X1L8 192 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 FAM237AA0A1B0GTK4 181 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 A0A1W2PR77 199 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 TRBC2A0A5B9 178 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 ARHGEF37A1IGU5 675 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 LRRC53A6NM62 1247 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 FAM25EA8MYX2 175 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 WDR46O15213 610 aaKnown RBP3.38□□□□□ -1.87
LEMD3-204ENST00000542032 ZNHIT1O43257 154 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 STX6O43752 255 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 KLHL41O60662 606 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 ZG16O60844 167 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 NOL3O60936 208 aaKnown RBP3.38□□□□□ -1.87
LEMD3-204ENST00000542032 TPPPO94811 219 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 OLFM2O95897 454 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 PNPP00491 289 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 EGFP01133 1207 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 ABCB1P08183 1280 aaPredicted RBP3.38□□□□□ -1.87
LEMD3-204ENST00000542032 FAM106CPP0CH98 169 aa3.38□□□□□ -1.87
LEMD3-204ENST00000542032 FDPSP14324 419 aaKnown RBP3.38□□□□□ -1.87
LEMD3-204ENST00000542032 PBLDP30039 288 aaPredicted RBP3.38□□□□□ -1.87
LEMD3-204ENST00000542032 DCTP40126 519 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms