RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 SMPD4Q9NXE4 827 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 CPNE7Q9UBL6 633 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 FAM198AQ9UFP1 575 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 FBXO40Q9UH90 709 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 MFHAS1Q9Y4C4 1052 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 HSPB11Q9Y547 144 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 CITO14578 2027 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ASPDHA6ND91 283 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 NT5C1B-RDH14C9J2C7 533 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ABCD4O14678 606 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ANKRD28O15084 1053 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 VPS26AO75436 327 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 SNAPINO95295 136 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 LCKP06239 509 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 FGF4P08620 206 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 YWHAQP27348 245 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 IL5RAQ01344 420 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 GPR19Q15760 415 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ZNF79Q15937 498 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 PROX2Q3B8N5 592 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 FCRLBQ6BAA4 426 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 RAB44Q7Z6P3 723 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-214ENST00000530886 OR8H2Q8N162 312 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 GHDCQ8N2G8 530 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 COLGALT1Q8NBJ5 622 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 AKAP1Q92667 903 aaKnown RBP eCLIP7.99□□□□□ -1.13
CSDE1-214ENST00000530886 KIAA1143Q96AT1 154 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-214ENST00000530886 FAM149B1Q96BN6 582 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 PIWIL1Q96J94 861 aaKnown RBP7.99□□□□□ -1.13
CSDE1-214ENST00000530886 PGLYRP2Q96PD5 576 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 PELOQ9BRX2 385 aaKnown RBP7.99□□□□□ -1.13
CSDE1-214ENST00000530886 HEXA-AS1Q9H8Q6 139 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 MCCC2Q9HCC0 563 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 CISHQ9NSE2 258 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 PLCXD1Q9NUJ7 323 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 GGA3Q9NZ52 723 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 CDH9Q9ULB4 789 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 BTRCQ9Y297 605 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ANKRD36A6QL64 1941 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 A8MUA0 341 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 WASH4PA8MWX3 477 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 OGTO15294 1046 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 HLA-DQB1P01920 261 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 MT-ND1P03886 318 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 PSAPP07602 524 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 SLC2A4P14672 509 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 GLUD2P49448 558 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 MAD2L1BPQ15013 274 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-214ENST00000530886 RABL3Q5HYI8 236 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 FAM219BQ5XKK7 198 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 CORO6Q6QEF8 472 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 NECAB2Q7Z6G3 386 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 KCNMB4Q86W47 210 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 DPP10Q8N608 796 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 ZNF540Q8NDQ6 660 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 DUSP18Q8NEJ0 188 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 ITFG1Q8TB96 612 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 ENKURQ8TC29 256 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 L3HYPDHQ96EM0 354 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 SERPINB11Q96P15 392 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 CEP41Q9BYV8 373 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 MMP28Q9H239 520 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 AKTIPQ9H8T0 292 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 IL1RL2Q9HB29 575 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 CD93Q9NPY3 652 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 CASS4Q9NQ75 786 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 SLC39A10Q9ULF5 831 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 NDRG4Q9ULP0 352 aaKnown RBP7.98□□□□□ -1.13
CSDE1-214ENST00000530886 ORC6Q9Y5N6 252 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 HNRNPDLO14979 420 aaKnown RBP7.98□□□□□ -1.13
CSDE1-214ENST00000530886 NOBOXO60393 691 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 VPS4BO75351 444 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 IPO13O94829 963 aaKnown RBP7.98□□□□□ -1.13
CSDE1-214ENST00000530886 RAF1P04049 648 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 HNRNPLP14866 589 aaKnown RBP eCLIP7.98□□□□□ -1.135e-8■□□□□ 8.7
CSDE1-214ENST00000530886 FMO3P31513 532 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 DCTP40126 519 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 RAB10P61026 200 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 PCDH1Q08174 1060 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 NFYCQ13952 458 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 DPYSL2Q16555 572 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 BAK1Q16611 211 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 GLYR1Q49A26 553 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-214ENST00000530886 RAP1GAP2Q684P5 730 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 OVCH2Q7RTZ1 564 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 TLK2Q86UE8 772 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 TSPYL5Q86VY4 417 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-214ENST00000530886 SLC22A9Q8IVM8 553 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 ADHFE1Q8IWW8 467 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 OR8H1Q8NGG4 311 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 BTN2A2Q8WVV5 523 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 COPS5Q92905 334 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 RBPMSQ93062 196 aaKnown RBP7.98□□□□□ -1.13
CSDE1-214ENST00000530886 ZNF669Q96BR6 464 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-214ENST00000530886 SORCS2Q96PQ0 1159 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 PITX2Q99697 317 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 ZNF416Q9BWM5 594 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 NIF3L1Q9GZT8 377 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 GSTO2Q9H4Y5 243 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 SP110Q9HB58 689 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms