RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	RNF6	Q9Y252	685 aa		11.26	□□□□□ -0.61
PSMD13-209	ENST00000529372	MRPS2	Q9Y399	296 aa	Known RBP	11.26	□□□□□ -0.61
PSMD13-209	ENST00000529372	CHD3	Q12873	2000 aa	Known RBP	11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	GTPBP10	A4D1E9	387 aa	Known RBP	11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	ASPDH	A6ND91	283 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	OR5H15	A6NDH6	313 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	MATN2	O00339	956 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	BTN3A1	O00481	513 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	KLK8	O60259	260 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	KCNJ13	O60928	360 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	POP7	O75817	140 aa	Known RBP	11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	ALB	P02768	609 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	CELA2A	P08217	269 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	RPL26	P61254	145 aa	Known RBP	11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	RPL7A	P62424	266 aa	Known RBP	11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	DSC2	Q02487	901 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	TMEM115	Q12893	351 aa	Predicted RBP	11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	XRCC4	Q13426	336 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	RBBP7	Q16576	425 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	CHSY3	Q70JA7	882 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	CPSF7	Q8N684	471 aa	Known RBP	11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	ACRBP	Q8NEB7	543 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	ARRDC2	Q8TBH0	407 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	SPATA32	Q96LK8	384 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	WWP1	Q9H0M0	922 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	DHX35	Q9H5Z1	703 aa	Known RBP	11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	SOX17	Q9H6I2	414 aa	Predicted RBP	11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	NT5M	Q9NPB1	228 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	CTSF	Q9UBX1	484 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	RPL26L1	Q9UNX3	145 aa	Known RBP	11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	SVEP1	Q4LDE5	3571 aa		11.25	□□□□□ -0.61
PSMD13-209	ENST00000529372	MGAM2	Q2M2H8	2515 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372		A0A1W2PQ72	361 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	VSTM2B	A6NLU5	285 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	SIGLEC16	A6NMB1	481 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	EIF3CL	B5ME19	914 aa	Known RBP	11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	NPIPA5	E9PKD4	350 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	FAM227A	F5H4B4	570 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	F12	P00748	615 aa	Predicted RBP	11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	SERPINA7	P05543	415 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	COX6A1	P12074	109 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	ABO	P16442	354 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	CHRNB4	P30926	498 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	FMO1	Q01740	532 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	PRKAA1	Q13131	559 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	SLC5A12	Q1EHB4	618 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	PPP1R15B	Q5SWA1	713 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	MARC1	Q5VT66	337 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	ATG9B	Q674R7	924 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	KLHL10	Q6JEL2	608 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	CEP128	Q6ZU80	1094 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	ZZZ3	Q8IYH5	903 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	RASGEF1A	Q8N9B8	481 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	ASB5	Q8WWX0	329 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	NELFB	Q8WX92	580 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	C8orf44	Q96CB5	159 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	RMDN2	Q96LZ7	410 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	C12orf66	Q96MD2	445 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	FRMD6	Q96NE9	622 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	VPS35	Q96QK1	796 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	EIF3C	Q99613	913 aa	Known RBP	11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	CNPY3	Q9BT09	278 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	SNRNP25	Q9BV90	132 aa	Known RBP	11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	NAA15	Q9BXJ9	866 aa	Known RBP	11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	CHRNA10	Q9GZZ6	450 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	PCDH9	Q9HC56	1237 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	SLC24A3	Q9HC58	644 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	KCNJ16	Q9NPI9	418 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	TXLNG	Q9NUQ3	528 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	CWC15	Q9P013	229 aa	Known RBP	11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	NPIPA1	Q9UND3	350 aa		11.24	□□□□□ -0.61
PSMD13-209	ENST00000529372	ASNA1	O43681	348 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	BMP10	O95393	424 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	TSPAN12	O95859	305 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	RAF1	P04049	648 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	ACPP	P15309	386 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	FDXR	P22570	491 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	NIPAL4	Q0D2K0	466 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	ATP13A5	Q4VNC0	1218 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	ATP13A4	Q4VNC1	1196 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	VWA3B	Q502W6	1294 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	ZNF766	Q5HY98	468 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	ISM2	Q6H9L7	571 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	NAPRT	Q6XQN6	538 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	TRIM73	Q86UV7	250 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	CCDC71	Q8IV32	467 aa	Predicted RBP	11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	BBS5	Q8N3I7	341 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	RPRML	Q8N4K4	120 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	TAB3	Q8N5C8	712 aa	Predicted RBP	11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	C19orf47	Q8N9M1	422 aa	Known RBP	11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	CCDC110	Q8TBZ0	833 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	CCHCR1	Q8TD31	782 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	HES7	Q9BYE0	225 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	VPS16	Q9H269	839 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	DEF6	Q9H4E7	631 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	STMN3	Q9NZ72	180 aa		11.23	□□□□□ -0.61
PSMD13-209	ENST00000529372	ANKRD66	B4E2M5	251 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372		H7C1Q1	480 aa		11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms