RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 ARHGEF33A8MVX0 844 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 B4GAT1O43505 415 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 ZBTB14O43829 449 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 MAGEC1O60732 1142 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 LRP3O75074 770 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 CER1O95813 267 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 FTH1P02794 183 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 C2P06681 752 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 ANXA6P08133 673 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 SBK3P0C264 359 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 RALBP11234 206 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 PEBP1P30086 187 aaKnown RBP6.32□□□□□ -1.4
CD44-214ENST00000525211 PHBP35232 272 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 DPP6P42658 865 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 MSH2P43246 934 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 OR1D5P58170 312 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 ILF3Q12906 894 aaKnown RBP eCLIP6.32□□□□□ -1.4
CD44-214ENST00000525211 FASTKQ14296 549 aaKnown RBP6.32□□□□□ -1.4
CD44-214ENST00000525211 CASP8Q14790 479 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 ELOCQ15369 112 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 OR4D1Q15615 310 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 PHKG1Q16816 387 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 RNF187Q5TA31 235 aaPredicted RBP6.32□□□□□ -1.4
CD44-214ENST00000525211 NKAIN2Q5VXU1 208 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 FAM45BPQ6NSW5 357 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 ZNF438Q7Z4V0 828 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 RABEPKQ7Z6M1 372 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 SLCO6A1Q86UG4 719 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 NAXDQ8IW45 347 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 FAM20CQ8IXL6 584 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 LMNTD2Q8IXW0 634 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 SLC22A15Q8IZD6 547 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 SFRP1Q8N474 314 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 TMEM151AQ8N4L1 468 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 Q8N9G6 341 aaPredicted RBP6.32□□□□□ -1.4
CD44-214ENST00000525211 KDF1Q8NAX2 398 aaPredicted RBP6.32□□□□□ -1.4
CD44-214ENST00000525211 FAM45AQ8TCE6 357 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 DENND1AQ8TEH3 1009 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 HEXDCQ8WVB3 486 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 HNRNPLLQ8WVV9 542 aaKnown RBP6.32□□□□□ -1.4
CD44-214ENST00000525211 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.32□□□□□ -1.4
CD44-214ENST00000525211 ANKRD7Q92527 254 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 CDKL2Q92772 493 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 KCNJ9Q92806 393 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 INPP5DQ92835 1189 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 ISL2Q96A47 359 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 ARL8AQ96BM9 186 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 MOCOSQ96EN8 888 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 LINGO1Q96FE5 620 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 C12orf66Q96MD2 445 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 HGH1Q9BTY7 390 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 MENTQ9BUN1 341 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 GSDMCQ9BYG8 508 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 ZCCHC2Q9C0B9 1178 aaKnown RBP6.32□□□□□ -1.4
CD44-214ENST00000525211 TSPYL1Q9H0U9 437 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 IMP3Q9NV31 184 aaKnown RBP6.32□□□□□ -1.4
CD44-214ENST00000525211 TMEM9Q9P0T7 183 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 ZNF180Q9UJW8 692 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 ASB1Q9Y576 335 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 DNMT3AQ9Y6K1 912 aaPredicted RBP6.32□□□□□ -1.4
CD44-214ENST00000525211 CSNK1G3Q9Y6M4 447 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 SPTBN4Q9H254 2564 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 PCNX2A6NKB5 2137 aa6.32□□□□□ -1.4
CD44-214ENST00000525211 COL27A1Q8IZC6 1860 aaPredicted RBP6.32□□□□□ -1.4
CD44-214ENST00000525211 A0A1W2PQM1 296 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 CPED1A4D0V7 1026 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 PMS2P1A4D2B8 440 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 NEMP2A6NFY4 417 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 GPR89AB7ZAQ6 455 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 E5RI56 91 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 H3BM21 787 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 AGRPO00253 132 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 NRP2O60462 931 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 PRAMEF10O60809 474 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 TCEA3O75764 348 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 ZIC2O95409 532 aaPredicted RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 MATN4O95460 622 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 C1orf105O95561 183 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 INHBAP08476 426 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 GPR89BP0CG08 455 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 ZNF883P0CG24 379 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 CCDC166P0CW27 439 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 MTHFD1P11586 935 aaKnown RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 F3P13726 295 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 CD1DP15813 335 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 ZNF37AP17032 561 aaPredicted RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 IDSP22304 550 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 CSF2RBP32927 897 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 SPRP35270 261 aaPredicted RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 LSSP48449 732 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 ARRB1P49407 418 aaPredicted RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 BLKP51451 505 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 ATXN3P54252 364 aaPredicted RBP6.31□□□□□ -1.4
CD44-214ENST00000525211 EPHA4P54764 986 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 RAB10P61026 200 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 CCL7P80098 99 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 POU4F1Q01851 419 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 NAB1Q13506 487 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 LRP8Q14114 963 aa6.31□□□□□ -1.4
CD44-214ENST00000525211 MPP2Q14168 576 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms