RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 MXD3Q9BW11 206 aa4.36□□□□□ -1.71
SMARCA5-203ENST00000515531 MRPL1Q9BYD6 325 aaKnown RBP4.36□□□□□ -1.71
SMARCA5-203ENST00000515531 VN1R1Q9GZP7 353 aa4.36□□□□□ -1.71
SMARCA5-203ENST00000515531 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.36□□□□□ -1.71
SMARCA5-203ENST00000515531 OSER1Q9NX31 292 aa4.36□□□□□ -1.71
SMARCA5-203ENST00000515531 RPS6KA6Q9UK32 745 aa4.36□□□□□ -1.71
SMARCA5-203ENST00000515531 ZHX1Q9UKY1 873 aaPredicted RBP4.36□□□□□ -1.71
SMARCA5-203ENST00000515531 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 ANKUB1A6NFN9 424 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 GAPDHSO14556 408 aaPredicted RBP4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 PRKRAO75569 313 aaKnown RBP4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 SLC6A6P31641 620 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 SLC9A3P48764 834 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 PDX1P52945 283 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 TPD52P55327 224 aaPredicted RBP4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 HILS1P60008 231 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 ITGA9Q13797 1035 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 RRS1Q15050 365 aaKnown RBP4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 WDR78Q5VTH9 848 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 TEX38Q6PEX7 206 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 DNAAF5Q86Y56 855 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 CFAP206Q8IYR0 622 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 MINDY1Q8N5J2 469 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 DDHD1Q8NEL9 900 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 CTCFLQ8NI51 663 aaPredicted RBP4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 PTERQ96BW5 349 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 GIMAP5Q96F15 307 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 MS4A10Q96PG2 267 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 BTBD10Q9BSF8 475 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 FLRT3Q9NZU0 649 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 CPSF2Q9P2I0 782 aaKnown RBP4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 SNX8Q9Y5X2 465 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 KIAA1210Q9ULL0 1709 aa4.35□□□□□ -1.71
SMARCA5-203ENST00000515531 A0A1W2PN81 502 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 NR5A2O00482 541 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 NGFP01138 241 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 SERPINB2P05120 415 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 OR2T7P0C7T2 308 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 FRMD6-AS1P0C7T7 363 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 CEACAM1P13688 526 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 CHRNA7P36544 502 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 PRKCZQ05513 592 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 DMPKQ09013 629 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 BAATQ14032 418 aaPredicted RBP4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 FFAR4Q5NUL3 377 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 TMEM211Q6ICI0 200 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 CFAP161Q6P656 301 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 SCML4Q8N228 414 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 TRIML1Q8N9V2 468 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 TMCO6Q96DC7 493 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 OPA3Q9H6K4 179 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 TBC1D17Q9HA65 648 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 C2orf42Q9NWW7 574 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 DPP3Q9NY33 737 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 CHORDC1Q9UHD1 332 aaPredicted RBP4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 MRPS28Q9Y2Q9 187 aaKnown RBP4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 WBP11Q9Y2W2 641 aaKnown RBP4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 NME7Q9Y5B8 376 aa4.34□□□□□ -1.71
SMARCA5-203ENST00000515531 SOS1Q07889 1333 aaPredicted RBP4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 IGHV4-61A0A0C4DH41 118 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 GLOD5A6NK44 160 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 K7ENM7 598 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 SH2B2O14492 632 aaPredicted RBP4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 ATP6V0E1O15342 81 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 TRMUO75648 421 aaKnown RBP4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 STARD3NLO95772 234 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 IGHV4-59P01825 116 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 EFNA1P20827 205 aaPredicted RBP4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 DNASE1P24855 282 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 NNMTP40261 264 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 UBXN2AP68543 259 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 CDR2Q01850 454 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 GPR17Q13304 367 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 SNAPC1Q16533 368 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 CYP4A22Q5TCH4 519 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 TMPRSS11FQ6ZWK6 438 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 SLC16A9Q7RTY1 509 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 ADIPOR2Q86V24 386 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 SYT2Q8N9I0 419 aaPredicted RBP4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 GRHL3Q8TE85 626 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 CCDC107Q8WV48 283 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 NUDT16L1Q9BRJ7 211 aaKnown RBP4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 S1PR5Q9H228 398 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 ARRDC1-AS1Q9H2J1 176 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 A4GALTQ9NPC4 353 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 SLC35C2Q9NQQ7 365 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 ZDHHC2Q9UIJ5 367 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 RIPK3Q9Y572 518 aa4.33□□□□□ -1.72
SMARCA5-203ENST00000515531 LOC101059948A0A1B0GTJ6 334 aa4.32□□□□□ -1.72
SMARCA5-203ENST00000515531 ZNF197O14709 1029 aa4.32□□□□□ -1.72
SMARCA5-203ENST00000515531 MEIS2O14770 477 aa4.32□□□□□ -1.72
SMARCA5-203ENST00000515531 AHCYL1O43865 530 aa4.32□□□□□ -1.72
SMARCA5-203ENST00000515531 RNASEH1O60930 286 aaKnown RBP4.32□□□□□ -1.72
SMARCA5-203ENST00000515531 WNT5AP41221 380 aa4.32□□□□□ -1.72
SMARCA5-203ENST00000515531 LIG4P49917 911 aa4.32□□□□□ -1.72
SMARCA5-203ENST00000515531 CDH13P55290 713 aa4.32□□□□□ -1.72
SMARCA5-203ENST00000515531 CBWD6Q4V339 395 aa4.32□□□□□ -1.72
SMARCA5-203ENST00000515531 C14orf177Q52M58 125 aa4.32□□□□□ -1.72
SMARCA5-203ENST00000515531 CBWD3Q5JTY5 395 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms