RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 MAP4P27816 1152 aaKnown RBP8.9□□□□□ -0.98
NUP54-207ENST00000508583 PDHA2P29803 388 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 SSTR1P30872 391 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 CSTF2P33240 577 aaKnown RBP eCLIP8.9□□□□□ -0.98
NUP54-207ENST00000508583 GP5P40197 560 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 CLCN7P51798 805 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 LIMK2P53671 638 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 PHF19Q5T6S3 580 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 CNSTQ6PJW8 725 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 CCDC91Q7Z6B0 441 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 AMIGO1Q86WK6 493 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 ZNF761Q86XN6 746 aaPredicted RBP8.9□□□□□ -0.98
NUP54-207ENST00000508583 UNC5BQ8IZJ1 945 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 LILRA3Q8N6C8 439 aaPredicted RBP8.9□□□□□ -0.98
NUP54-207ENST00000508583 WDR36Q8NI36 951 aaKnown RBP8.9□□□□□ -0.98
NUP54-207ENST00000508583 RAD51AP1Q96B01 352 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 SLC22A18Q96BI1 424 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 CYTH2Q99418 400 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 HGH1Q9BTY7 390 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 LRRC4CQ9HCJ2 640 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 OR6C2Q9NZP2 312 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 SLC24A2Q9UI40 661 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 SLC39A10Q9ULF5 831 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 WASF3Q9UPY6 502 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 VWA7Q9Y334 891 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 ENTPD2Q9Y5L3 495 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 IKBKGQ9Y6K9 419 aa8.9□□□□□ -0.98
NUP54-207ENST00000508583 AKAP13Q12802 2813 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 TMEM8BA6NDV4 472 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 OR5K3A6NET4 321 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 FAM159BA6NKW6 160 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 C2orf74A8MZ97 194 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 RASSF9O75901 435 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 MATN4O95460 622 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 C8GP07360 202 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 TUBBP07437 444 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 ANKRD34CP0C6C1 535 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 MPC1LP0DKB6 136 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 THRAP10827 490 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 SPINK2P20155 84 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 TNFRSF8P28908 595 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 RBMS1P29558 406 aaKnown RBP8.89□□□□□ -0.99
NUP54-207ENST00000508583 SPRP35270 261 aaPredicted RBP8.89□□□□□ -0.99
NUP54-207ENST00000508583 HSD17B2P37059 387 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 RAB28P51157 221 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 CLDN6P56747 220 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 IL2P60568 153 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 POU4F1Q01851 419 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 ZFP36L1Q07352 338 aaKnown RBP8.89□□□□□ -0.99
NUP54-207ENST00000508583 SP140Q13342 867 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 GBX1Q14549 363 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 NAA25Q14CX7 972 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 TRADDQ15628 312 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 KLHL38Q2WGJ6 581 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 KBTBD12Q3ZCT8 623 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 ZNF789Q5FWF6 425 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 GRTP1Q5TC63 336 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 HECTD2Q5U5R9 776 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 NKAIN2Q5VXU1 208 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 USP53Q70EK8 1073 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 TRMT10CQ7L0Y3 403 aaKnown RBP8.89□□□□□ -0.99
NUP54-207ENST00000508583 ZC3HC1Q86WB0 502 aaKnown RBP8.89□□□□□ -0.99
NUP54-207ENST00000508583 KMT5CQ86Y97 462 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 MYO1HQ8N1T3 1032 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 AGBL5Q8NDL9 886 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 OR52E1Q8NGJ3 308 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 CFAP61Q8NHU2 1237 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 LKAAEAR1Q8TD35 194 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 FBF1Q8TES7 1133 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 UBXN4Q92575 508 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 FAM136AQ96C01 138 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 ELMO2Q96JJ3 720 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 NDNQ99608 321 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 GPR21Q99679 349 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 NUDT22Q9BRQ3 303 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 TBC1D10AQ9BXI6 508 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 POLR1BQ9H9Y6 1135 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 RDH14Q9HBH5 336 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 PLAC1Q9HBJ0 212 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 POPDC3Q9HBV1 291 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 SYTL2Q9HCH5 934 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 HRASLS2Q9NWW9 162 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 LNPEPQ9UIQ6 1025 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 KLK13Q9UKR3 277 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 ATXN7L1Q9ULK2 861 aaPredicted RBP8.89□□□□□ -0.99
NUP54-207ENST00000508583 NFU1Q9UMS0 254 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 CDYLQ9Y232 598 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 TDRKHQ9Y2W6 561 aaKnown RBP8.89□□□□□ -0.99
NUP54-207ENST00000508583 PCDHGA8Q9Y5G5 932 aa8.89□□□□□ -0.99
NUP54-207ENST00000508583 NCOR2Q9Y618 2525 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 A0A087WUV0 522 aaPredicted RBP8.88□□□□□ -0.99
NUP54-207ENST00000508583 IGHV5-10-1A0A0J9YXX1 117 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 FAM95CA0A1B0GW59 222 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 FAM149AA5PLN7 773 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 OR6C74A6NCV1 312 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 TLCD2A6NGC4 264 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 PLD2O14939 933 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 CASC3O15234 703 aaKnown RBP8.88□□□□□ -0.99
NUP54-207ENST00000508583 SLC16A5O15375 505 aa8.88□□□□□ -0.99
NUP54-207ENST00000508583 CAPN5O15484 640 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms