RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 TRBV23OR9-2A0A075B6M9 112 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 KIR2DS5A0A0G2JLQ3 304 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 A0A0G2JNG1 304 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 A6NCN8 305 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 OR5K4A6NMS3 321 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 KIR2DS3K7RE56 304 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 IFRD1O00458 451 aaPredicted RBP9.8□□□□□ -0.84
NUP54-203ENST00000504173 CTIFO43310 598 aaKnown RBP9.8□□□□□ -0.84
NUP54-203ENST00000504173 NOBOXO60393 691 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 PDHA2P29803 388 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 HSD17B3P37058 310 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 RPIAP49247 311 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 LIMK2P53671 638 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 SLC12A2P55011 1212 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 CDKN2DP55273 166 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 MAZP56270 477 aaKnown RBP9.8□□□□□ -0.84
NUP54-203ENST00000504173 DAB2P98082 770 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 PDAP1Q13442 181 aaKnown RBP9.8□□□□□ -0.84
NUP54-203ENST00000504173 KIR2DS5Q14953 304 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 NR0B2Q15466 257 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 C14orf28Q4W4Y0 310 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 PLEKHS1Q5SXH7 462 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 AGAP9Q5VTM2 703 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 OGFOD3Q6PK18 319 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 ABRAXAS1Q6UWZ7 409 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 XKR5Q6UX68 686 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 WASH2PQ6VEQ5 465 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 TAOK1Q7L7X3 1001 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 PRICKLE2Q7Z3G6 844 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 PIM3Q86V86 326 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 TMPRSS12Q86WS5 348 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 SFTPA2Q8IWL1 248 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 TRIM48Q8IWZ4 208 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 SPACA3Q8IXA5 215 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 SLC35F3Q8IY50 421 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 NAGSQ8N159 534 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 PIP4P2Q8N4L2 257 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 SIDT2Q8NBJ9 832 aaKnown RBP9.8□□□□□ -0.84
NUP54-203ENST00000504173 GPR156Q8NFN8 814 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 MYRIPQ8NFW9 859 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 MAPK15Q8TD08 544 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 SLC37A2Q8TED4 501 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 SLC44A1Q8WWI5 657 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 PATE1Q8WXA2 126 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 INPP5DQ92835 1189 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 CNDP2Q96KP4 475 aaKnown RBP9.8□□□□□ -0.84
NUP54-203ENST00000504173 APOLD1Q96LR9 279 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 RMDN2Q96LZ7 410 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 C12orf66Q96MD2 445 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 MCMBPQ9BTE3 642 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 WASH6PQ9NQA3 447 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 NCKIPSDQ9NZQ3 722 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 SCHIP1Q9P0W5 487 aaPredicted RBP9.8□□□□□ -0.84
NUP54-203ENST00000504173 GALPQ9UBC7 116 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 TSR3Q9UJK0 312 aaKnown RBP9.8□□□□□ -0.84
NUP54-203ENST00000504173 WDR37Q9Y2I8 494 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 DHRS7Q9Y394 339 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 BOD1L1Q8NFC6 3051 aa9.8□□□□□ -0.84
NUP54-203ENST00000504173 ARHGEF17Q96PE2 2063 aaPredicted RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 UTP20O75691 2785 aaKnown RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 CCDC151A5D8V7 595 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 OR52A4PA6NMU1 304 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 GPC4O75487 556 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 SLCO2B1O94956 709 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 LDOC1O95751 146 aaPredicted RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 MYF5P13349 255 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 BRAFP15056 766 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 FDXRP22570 491 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 SKIV2L2P42285 1042 aaKnown RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 SERPINB9P50453 376 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 DUSP3P51452 185 aaPredicted RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 CLCN7P51798 805 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 UCNP55089 124 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 TAS2R39P59534 338 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 POU4F1Q01851 419 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 USP10Q14694 798 aaKnown RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 CLCA4Q14CN2 919 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 RTP5Q14D33 572 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 RPE65Q16518 533 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 PROX2Q3B8N5 592 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 C4orf17Q53FE4 359 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 IYDQ6PHW0 289 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 SLC9B2Q86UD5 537 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 VRK3Q8IV63 474 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 CPNE9Q8IYJ1 553 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 SLC22A15Q8IZD6 547 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 SFRP1Q8N474 314 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 ARL14Q8N4G2 192 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 MREGQ8N565 214 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 AVL9Q8NBF6 648 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 ACVR1CQ8NER5 493 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 SPDYE1Q8NFV5 336 aaPredicted RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 GIMAP7Q8NHV1 300 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 CD200R1Q8TD46 325 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 SNRNP27Q8WVK2 155 aaKnown RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 SKA2Q8WVK7 121 aaPredicted RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 CXorf40BQ96DE9 158 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 TSPAN17Q96FV3 270 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 GPR22Q99680 433 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 SLC30A3Q99726 388 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms