RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 DNAJC3Q13217 504 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 TDGQ13569 410 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 FRG1Q14331 258 aaKnown RBP4.7□□□□□ -1.66
CMSS1-209ENST00000497345 ELAVL3Q14576 367 aaKnown RBP4.7□□□□□ -1.66
CMSS1-209ENST00000497345 STARD3Q14849 445 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 UBXN2BQ14CS0 331 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 TERF2Q15554 542 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 TCEA2Q15560 299 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 SMAD2Q15796 467 aaKnown RBP4.7□□□□□ -1.66
CMSS1-209ENST00000497345 CST6Q15828 149 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 CDKN3Q16667 212 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 ZXDCQ2QGD7 858 aaPredicted RBP4.7□□□□□ -1.66
CMSS1-209ENST00000497345 PREPLQ4J6C6 727 aaPredicted RBP4.7□□□□□ -1.66
CMSS1-209ENST00000497345 ATP13A5Q4VNC0 1218 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 TMEM196Q5HYL7 178 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 HABP4Q5JVS0 413 aaKnown RBP4.7□□□□□ -1.66
CMSS1-209ENST00000497345 SEL1L3Q68CR1 1132 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 POMZP3Q6PJE2 187 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 BRAT1Q6PJG6 821 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 DOK6Q6PKX4 331 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 TIFABQ6ZNK6 161 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 Q6ZS52 159 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 ZCCHC23Q6ZST2 131 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 CYS1Q717R9 158 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 ERN2Q76MJ5 926 aaKnown RBP4.7□□□□□ -1.66
CMSS1-209ENST00000497345 CPLX4Q7Z7G2 160 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 DSG4Q86SJ6 1040 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 TBC1D1Q86TI0 1168 aaPredicted RBP4.7□□□□□ -1.66
CMSS1-209ENST00000497345 RALGPS2Q86X27 583 aaPredicted RBP4.7□□□□□ -1.66
CMSS1-209ENST00000497345 NUDCD3Q8IVD9 361 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 CNTN4Q8IWV2 1026 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 PELI3Q8N2H9 469 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 AADATQ8N5Z0 425 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 DEFB119Q8N690 84 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 CLDN19Q8N6F1 224 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 LINC00482Q8N8I6 264 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 BVESQ8NE79 360 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 TMIEQ8NEW7 156 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 OR14C36Q8NHC7 312 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 MAFAQ8NHW3 353 aaPredicted RBP4.7□□□□□ -1.66
CMSS1-209ENST00000497345 RPLP0P6Q8NHW5 317 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 AGR3Q8TD06 166 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 LRRC8CQ8TDW0 803 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 CXorf40AQ8TE69 158 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 DENND1AQ8TEH3 1009 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 HEXDCQ8WVB3 486 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 SKA2Q8WVK7 121 aaPredicted RBP4.7□□□□□ -1.66
CMSS1-209ENST00000497345 ANKRD49Q8WVL7 239 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 HMGB4Q8WW32 186 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 ECHDC3Q96DC8 303 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 MOCOSQ96EN8 888 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 DCUN1D1Q96GG9 259 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 PPP1R16AQ96I34 528 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 SEC16BQ96JE7 1060 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 GPR21Q99679 349 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 GPR22Q99680 433 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 SHCBP1LQ9BZQ2 653 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 TMEM245Q9H330 911 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 FAM83DQ9H4H8 585 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 FGFR1OP2Q9NVK5 253 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 SENP1Q9P0U3 644 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 SERGEFQ9UGK8 458 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 DCDC2Q9UHG0 476 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 EMCNQ9ULC0 261 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 RPL26L1Q9UNX3 145 aaKnown RBP4.7□□□□□ -1.66
CMSS1-209ENST00000497345 INVSQ9Y283 1065 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 ACOT9Q9Y305 439 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 VWA7Q9Y334 891 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 PLLPQ9Y342 182 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 COMMD10Q9Y6G5 202 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 TCF20Q9UGU0 1960 aaKnown RBP4.7□□□□□ -1.66
CMSS1-209ENST00000497345 CHD7Q9P2D1 2997 aa4.7□□□□□ -1.66
CMSS1-209ENST00000497345 KIAA1549LQ6ZVL6 1849 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 TBC1D3DA0A087WVF3 549 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 TBC1D3IA0A087WXS9 549 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 TBC1D3EA0A087X179 549 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 TBC1D3KA0A087X1G2 549 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 GMNCA6NCL1 334 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 NPEPPSL1A6NEC2 478 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 TBC1D3FA6NER0 549 aaPredicted RBP4.69□□□□□ -1.66
CMSS1-209ENST00000497345 NEMP2A6NFY4 417 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 IGLON5A6NGN9 336 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 NCF1BA6NI72 391 aaPredicted RBP4.69□□□□□ -1.66
CMSS1-209ENST00000497345 OR2AG2A6NM03 316 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 NCF1CA8MVU1 366 aaPredicted RBP4.69□□□□□ -1.66
CMSS1-209ENST00000497345 SUPT3HB4E1H0 165 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 TBC1D3LB9A6J9 549 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 GAPDHSO14556 408 aaPredicted RBP4.69□□□□□ -1.66
CMSS1-209ENST00000497345 WNT9AO14904 365 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 PFDN6O15212 129 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 SLC31A1O15431 190 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 PLIN3O60664 434 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 GLRA3O75311 464 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 VPS26AO75436 327 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 SUPT3HO75486 399 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 LYPLA1O75608 230 aaPredicted RBP4.69□□□□□ -1.66
CMSS1-209ENST00000497345 RECQL5O94762 991 aaPredicted RBP4.69□□□□□ -1.66
CMSS1-209ENST00000497345 SLC25A14O95258 325 aaPredicted RBP4.69□□□□□ -1.66
CMSS1-209ENST00000497345 ASMTLO95671 621 aa4.69□□□□□ -1.66
CMSS1-209ENST00000497345 DNTTP04053 509 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms