RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 KRT35Q92764 455 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 LRRC45Q96CN5 670 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 CLIP3Q96DZ5 547 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 DPH2Q9BQC3 489 aaPredicted RBP8.29□□□□□ -1.08
PRKCB-208ENST00000487674 APOL2Q9BQE5 337 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 HEMGNQ9BXL5 484 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 OR52A5Q9H2C5 316 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 SRMSQ9H3Y6 488 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 COG4Q9H9E3 785 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 ACTR5Q9H9F9 607 aaPredicted RBP8.29□□□□□ -1.08
PRKCB-208ENST00000487674 LRRC4CQ9HCJ2 640 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 LUC7LQ9NQ29 371 aaKnown RBP8.29□□□□□ -1.08
PRKCB-208ENST00000487674 PCMTD2Q9NV79 361 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 FEZ2Q9UHY8 353 aaPredicted RBP8.29□□□□□ -1.08
PRKCB-208ENST00000487674 TCFL5Q9UL49 500 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 EFR3BQ9Y2G0 817 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 ZNF451Q9Y4E5 1061 aa8.29□□□□□ -1.08
PRKCB-208ENST00000487674 PIKFYVEQ9Y2I7 2098 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 CCDC66A2RUB6 948 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 C9J4A7 227 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 BTN3A1O00481 513 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 KCNN4O15554 427 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 DPM1O60762 260 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 TMEM63AO94886 807 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 AGFG2O95081 481 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 GSTM1P09488 218 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 RBP3P10745 1247 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 ATP1B2P14415 290 aaPredicted RBP8.28□□□□□ -1.08
PRKCB-208ENST00000487674 ST6GAL1P15907 406 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 GNLYP22749 145 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 CTNNA2P26232 953 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 PRDX3P30048 256 aaKnown RBP8.28□□□□□ -1.08
PRKCB-208ENST00000487674 PTPN7P35236 360 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 CD151P48509 253 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 CCL11P51671 97 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 VAV2P52735 878 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 RRADP55042 308 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 EIF3EP60228 445 aaKnown RBP8.28□□□□□ -1.08
PRKCB-208ENST00000487674 GSTM4Q03013 218 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 RPA4Q13156 261 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 TBX2Q13207 712 aaPredicted RBP8.28□□□□□ -1.08
PRKCB-208ENST00000487674 MSLNQ13421 630 aaPredicted RBP8.28□□□□□ -1.08
PRKCB-208ENST00000487674 NCF4Q15080 339 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 SPA17Q15506 151 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 GPR33Q49SQ1 333 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 ZNF658BQ4V348 819 aaPredicted RBP8.28□□□□□ -1.08
PRKCB-208ENST00000487674 ANKRD20A2Q5SQ80 823 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 FHL5Q5TD97 284 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 ANKRD20A1Q5TYW2 823 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 PRAMEF17Q5VTA0 474 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 ANKRD20A3Q5VUR7 823 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 DESI1Q6ICB0 168 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 LCN10Q6JVE6 187 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 SARM1Q6SZW1 724 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 MED25Q71SY5 747 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 SYTL1Q8IYJ3 562 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 TMEM102Q8N9M5 508 aaPredicted RBP8.28□□□□□ -1.08
PRKCB-208ENST00000487674 OR52E1Q8NGJ3 308 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 SPATA13Q96N96 652 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 FERD3LQ96RJ6 166 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 TBL1YQ9BQ87 522 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 DHRS4Q9BTZ2 278 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 TFB2MQ9H5Q4 396 aaKnown RBP8.28□□□□□ -1.08
PRKCB-208ENST00000487674 MVB12BQ9H7P6 319 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 C10orf88Q9H8K7 445 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 ARNT2Q9HBZ2 717 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 ZDHHC3Q9NYG2 299 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 PADI2Q9Y2J8 665 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 MAP4K5Q9Y4K4 846 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 PCDHA13Q9Y5I0 950 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 FER1L5A0AVI2 2057 aa8.28□□□□□ -1.08
PRKCB-208ENST00000487674 ESPL1Q14674 2120 aa8.27□□□□□ -1.08
PRKCB-208ENST00000487674 SEC16AO15027 2179 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 HIVEP3Q5T1R4 2406 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 TRBV5-4A0A0C4DH59 114 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 C2orf74A8MZ97 194 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 E7EQ34 232 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 H7C0S8 307 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 BTN3A3O00478 584 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 CCL22O00626 93 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 DDX3YO15523 660 aaKnown RBP8.27□□□□□ -1.09
PRKCB-208ENST00000487674 LDB2O43679 373 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 CAPN1P07384 714 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 HBQ1P09105 142 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 ACRV1P26436 265 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 VARSP26640 1264 aaKnown RBP8.27□□□□□ -1.09
PRKCB-208ENST00000487674 MC4RP32245 332 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 LMAN1P49257 510 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 ITGA1P56199 1179 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 TMPRSS15P98073 1019 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 BOP1Q14137 746 aaKnown RBP8.27□□□□□ -1.09
PRKCB-208ENST00000487674 SKOR2Q2VWA4 1001 aaPredicted RBP8.27□□□□□ -1.09
PRKCB-208ENST00000487674 PTCHD3Q3KNS1 767 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 FAM69BQ5VUD6 431 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 DENND5AQ6IQ26 1287 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 JMJD6Q6NYC1 403 aaPredicted RBP8.27□□□□□ -1.09
PRKCB-208ENST00000487674 ZNF449Q6P9G9 518 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 DARS2Q6PI48 645 aaKnown RBP8.27□□□□□ -1.09
PRKCB-208ENST00000487674 SPESP1Q6UW49 350 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 CDHR3Q6ZTQ4 885 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms