RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 GPR33Q49SQ1 333 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 ZRANB3Q5FWF4 1079 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 DCAF10Q5QP82 559 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 RHBDD2Q6NTF9 364 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 SPOCD1Q6ZMY3 1216 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 MRGPREQ86SM8 312 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 DAAM2Q86T65 1068 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 ADGRF3Q8IZF5 1079 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 LILRA3Q8N6C8 439 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-227ENST00000485102 OR4K2Q8NGD2 314 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 C19orf60Q96EN9 201 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 DCUN1D1Q96GG9 259 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 QKIQ96PU8 341 aaKnown RBP eCLIP12.61□□□□□ -0.39
HDAC6-227ENST00000485102 BAG1Q99933 345 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-227ENST00000485102 GBA3Q9H227 469 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 NHEJ1Q9H9Q4 299 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-227ENST00000485102 ARNT2Q9HBZ2 717 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 ASF1BQ9NVP2 202 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 hCG_1818297A0A087WSY0 165 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 A1L4Q6 167 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 GSAPA4D1B5 854 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 C2orf74A8MZ97 194 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 CFAP99D6REC4 459 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 IFRD1O00458 451 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-227ENST00000485102 ZRANB2O95218 330 aaKnown RBP eCLIP12.6□□□□□ -0.39
HDAC6-227ENST00000485102 CRTAMO95727 393 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 PTMAP06454 111 aaKnown RBP12.6□□□□□ -0.39
HDAC6-227ENST00000485102 ATP1B2P14415 290 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-227ENST00000485102 DCTP40126 519 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 FAM69BQ5VUD6 431 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 Q6ZS92 163 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 CDHR3Q6ZTQ4 885 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 SNX20Q7Z614 316 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 ZC3H18Q86VM9 953 aaKnown RBP12.6□□□□□ -0.39
HDAC6-227ENST00000485102 AMIGO1Q86WK6 493 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 KATNAL2Q8IYT4 538 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 GPR135Q8IZ08 494 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 RCOR2Q8IZ40 523 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 NXPE1Q8N323 547 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 GALNT16Q8N428 558 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 OR52E1Q8NGJ3 308 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 PROKR1Q8TCW9 393 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.6□□□□□ -0.39
HDAC6-227ENST00000485102 FERD3LQ96RJ6 166 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 COPS8Q99627 209 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 GORASP1Q9BQQ3 440 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 ZNF552Q9H707 407 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-227ENST00000485102 COG4Q9H9E3 785 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 LUZP4Q9P127 313 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 RSPH14Q9UHP6 348 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 FKBPLQ9UIM3 349 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 AAR2Q9Y312 384 aaKnown RBP12.6□□□□□ -0.39
HDAC6-227ENST00000485102 PCM1Q15154 2024 aa12.6□□□□□ -0.39
HDAC6-227ENST00000485102 TRBV5-4A0A0C4DH59 114 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 CCDC66A2RUB6 948 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 ANKUB1A6NFN9 424 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 KRT86O43790 486 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 SPOPO43791 374 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 GABRA4P48169 554 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 LMAN1P49257 510 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 BOP1Q14137 746 aaKnown RBP12.59□□□□□ -0.39
HDAC6-227ENST00000485102 NR6A1Q15406 480 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 LYPLAL1Q5VWZ2 237 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 KAZNQ674X7 775 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 ZNF787Q6DD87 383 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 ITPRIPL1Q6GPH6 555 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 MRPL14Q6P1L8 145 aaKnown RBP12.59□□□□□ -0.39
HDAC6-227ENST00000485102 SPESP1Q6UW49 350 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 BBS12Q6ZW61 710 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 KLHDC8BQ8IXV7 354 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 SLC34A3Q8N130 599 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 CISD2Q8N5K1 135 aaKnown RBP12.59□□□□□ -0.39
HDAC6-227ENST00000485102 TTC13Q8NBP0 860 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 SPC24Q8NBT2 197 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 CLEC1AQ8NC01 280 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 OR2Y1Q8NGV0 311 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 TM9SF4Q92544 642 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 TFGQ92734 400 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-227ENST00000485102 PTERQ96BW5 349 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 RBM41Q96IZ5 413 aaKnown RBP12.59□□□□□ -0.39
HDAC6-227ENST00000485102 C5orf34Q96MH7 638 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 GBP5Q96PP8 586 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 CHP1Q99653 195 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 AP1M1Q9BXS5 423 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 SLC7A5P2Q9GIP4 190 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 VPS37BQ9H9H4 285 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 ZDHHC3Q9NYG2 299 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 ACTR10Q9NZ32 417 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 FEZ2Q9UHY8 353 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-227ENST00000485102 CRLS1Q9UJA2 301 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 ALG6Q9Y672 507 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 LRBAP50851 2863 aa12.59□□□□□ -0.39
HDAC6-227ENST00000485102 TEP1Q99973 2627 aaKnown RBP12.58□□□□□ -0.39
HDAC6-227ENST00000485102 SNRNP200O75643 2136 aaKnown RBP12.58□□□□□ -0.4
HDAC6-227ENST00000485102 H7C0S8 307 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 APOC4-APOC2K7ER74 178 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 PEX12O00623 359 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 DDX3YO15523 660 aaKnown RBP12.58□□□□□ -0.4
HDAC6-227ENST00000485102 ONECUT2O95948 504 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 APOC2P02655 101 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms