RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 LPAR3Q9UBY5 353 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 ZNF212Q9UDV6 495 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 SLC12A6Q9UHW9 1150 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 GNPTGQ9UJJ9 305 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 MALRD1Q5VYJ5 2156 aa6.2□□□□□ -1.42
CHD6-209ENST00000482596 ZNF407Q9C0G0 2248 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 SCO2A0A1W2PP80 73 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 UBA6A0AVT1 1052 aaPredicted RBP6.19□□□□□ -1.42
CHD6-209ENST00000482596 SLC9B1P1A6NJY1 282 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 I6L893 689 aaPredicted RBP6.19□□□□□ -1.42
CHD6-209ENST00000482596 SYT5O00445 386 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 PAGE1O75459 146 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 SOD1P00441 154 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 MYL1P05976 194 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 PRR35P0CG20 571 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 XRCC1P18887 633 aaPredicted RBP6.19□□□□□ -1.42
CHD6-209ENST00000482596 PIK3CAP42336 1068 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 NR0B1P51843 470 aaKnown RBP6.19□□□□□ -1.42
CHD6-209ENST00000482596 POU4F1Q01851 419 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 WIPI1Q5MNZ9 446 aaPredicted RBP6.19□□□□□ -1.42
CHD6-209ENST00000482596 ARL6IP4Q66PJ3 421 aaKnown RBP6.19□□□□□ -1.42
CHD6-209ENST00000482596 RAET1GQ6H3X3 334 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 TRIM48Q8IWZ4 208 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 RAVER1Q8IY67 606 aaKnown RBP6.19□□□□□ -1.42
CHD6-209ENST00000482596 PAF1Q8N7H5 531 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 UBASH3BQ8TF42 649 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 SH3GL2Q99962 352 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 YIPF4Q9BSR8 244 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 CEP41Q9BYV8 373 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 BHLHE41Q9C0J9 482 aaPredicted RBP6.19□□□□□ -1.42
CHD6-209ENST00000482596 SLC22A11Q9NSA0 550 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 TMEM160Q9NX00 188 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 SOHLH2Q9NX45 425 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 DHCR7Q9UBM7 475 aaKnown RBP6.19□□□□□ -1.42
CHD6-209ENST00000482596 WBP11Q9Y2W2 641 aaKnown RBP6.19□□□□□ -1.42
CHD6-209ENST00000482596 TENM2Q9NT68 2774 aa6.19□□□□□ -1.42
CHD6-209ENST00000482596 CADP27708 2225 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 COL7A1Q02388 2944 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 ILVBLA1L0T0 632 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 TUBAL3A6NHL2 446 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 OR5K4A6NMS3 321 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 CES2O00748 559 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 TTI1O43156 1089 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 ZBTB11O95625 1053 aaPredicted RBP6.18□□□□□ -1.42
CHD6-209ENST00000482596 BPNT1O95861 308 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 BMP15O95972 392 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 SLC2A4P14672 509 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 SYT1P21579 422 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 TNFAIP3P21580 790 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 ETFBP38117 255 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 PEX19P40855 299 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 GNA12Q03113 381 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 CEBPZQ03701 1054 aaKnown RBP6.18□□□□□ -1.42
CHD6-209ENST00000482596 RAD51Q06609 339 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 ADCY2Q08462 1091 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 PAK1Q13153 545 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 CLEC12BQ2HXU8 276 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 SLC25A35Q3KQZ1 300 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 DNTTIP2Q5QJE6 756 aaKnown RBP6.18□□□□□ -1.42
CHD6-209ENST00000482596 TMTC4Q5T4D3 741 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 AFMIDQ63HM1 303 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 DENND2CQ68D51 928 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 VN1R5Q7Z5H4 357 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 CAMK1DQ8IU85 385 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 WDR75Q8IWA0 830 aaKnown RBP6.18□□□□□ -1.42
CHD6-209ENST00000482596 HSCBQ8IWL3 235 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 GALNT12Q8IXK2 581 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.18□□□□□ -1.42
CHD6-209ENST00000482596 XXYLT1Q8NBI6 393 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 OR5M3Q8NGP4 307 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 CCDC110Q8TBZ0 833 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 SLC35F5Q8WV83 523 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 CELF6Q96J87 481 aaKnown RBP6.18□□□□□ -1.42
CHD6-209ENST00000482596 AK8Q96MA6 479 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 GDAP1L1Q96MZ0 367 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 SLC2A13Q96QE2 648 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 AGAP2Q99490 1192 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 ANP32EQ9BTT0 268 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 NIF3L1Q9GZT8 377 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 KLHL25Q9H0H3 589 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 ATG10Q9H0Y0 220 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 UBTD1Q9HAC8 227 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 SLC40A1Q9NP59 571 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 OLFML3Q9NRN5 406 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 AGPAT3Q9NRZ7 376 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 CISHQ9NSE2 258 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 HESX1Q9UBX0 185 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 MFHAS1Q9Y4C4 1052 aa6.18□□□□□ -1.42
CHD6-209ENST00000482596 EML6Q6ZMW3 1958 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 KIAA1549Q9HCM3 1950 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 OR52A4PA6NMU1 304 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 USP27XA6NNY8 438 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 E7EQ34 232 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 TCF21O43680 179 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 USP1O94782 785 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 TMCC1O94876 653 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 IGSF6O95976 241 aa6.17□□□□□ -1.42
CHD6-209ENST00000482596 RPN1P04843 607 aaKnown RBP6.17□□□□□ -1.42
CHD6-209ENST00000482596 ATP1A1P05023 1023 aaKnown RBP6.17□□□□□ -1.42
CHD6-209ENST00000482596 UQCRHP07919 91 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms