RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 PEX11BO96011 259 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 CYP11B1P15538 503 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 ALAS2P22557 587 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 NSG1P42857 185 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 CAMK4Q16566 473 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 TFDP3Q5H9I0 405 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 SCYL2Q6P3W7 929 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 NEK10Q6ZWH5 1172 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 FAM57AQ8TBR7 257 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 ZNF599Q96NL3 588 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 SECISBP2Q96T21 854 aaKnown RBP11.38□□□□□ -0.59
USP11-208ENST00000480104 CRACR2AQ9BSW2 395 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 CRB3Q9BUF7 120 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 NAA15Q9BXJ9 866 aaKnown RBP11.38□□□□□ -0.59
USP11-208ENST00000480104 SLC26A1Q9H2B4 701 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 PLEKHF2Q9H8W4 249 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 FANCLQ9NW38 375 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 IRAK4Q9NWZ3 460 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 NXT1Q9UKK6 140 aaKnown RBP11.38□□□□□ -0.59
USP11-208ENST00000480104 FZD10Q9ULW2 581 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 CPAMD8Q8IZJ3 1885 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 MATN2O00339 956 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 BTN3A1O00481 513 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 ALBP02768 609 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 COX6A1P12074 109 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 PTGER1P34995 402 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 GABRA4P48169 554 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 LRRC63Q05C16 580 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 NFE2L1Q14494 772 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 ZIC1Q15915 447 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 SLC5A12Q1EHB4 618 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 RALGPS1Q5JS13 557 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 ABHD17BQ5VST6 288 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 FBXW10Q5XX13 1052 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 TRIM65Q6PJ69 517 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 CNSTQ6PJW8 725 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 AMZ2Q86W34 360 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 TMTC1Q8IUR5 882 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 C19orf47Q8N9M1 422 aaKnown RBP11.37□□□□□ -0.59
USP11-208ENST00000480104 MSANTD4Q8NCY6 345 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.37□□□□□ -0.59
USP11-208ENST00000480104 CPA5Q8WXQ8 436 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 C12orf66Q96MD2 445 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 INSM2Q96T92 566 aaPredicted RBP11.37□□□□□ -0.59
USP11-208ENST00000480104 NRTNQ99748 197 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 GNPTGQ9UJJ9 305 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 MKL2Q9ULH7 1088 aa11.37□□□□□ -0.59
USP11-208ENST00000480104 RGSL1A5PLK6 1076 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 BTN3A3O00478 584 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 ITGAMP11215 1152 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 PTGS2P35354 604 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 NUP107P57740 925 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 ZNF33BQ06732 778 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 KRTAP1-1Q07627 177 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 PMPCAQ10713 525 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 VWA3BQ502W6 1294 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 TAF3Q5VWG9 929 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 NAA35Q5VZE5 725 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 TTI2Q6NXR4 508 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 TLDC1Q6P9B6 456 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 TTLL10Q6ZVT0 673 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 NDUFAF7Q7L592 441 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 TRIM73Q86UV7 250 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 PRSS58Q8IYP2 241 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 AMER2Q8N7J2 671 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 GPR26Q8NDV2 337 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 LPCAT1Q8NF37 534 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 SPDYE1Q8NFV5 336 aaPredicted RBP11.36□□□□□ -0.59
USP11-208ENST00000480104 FAM81BQ96LP2 452 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 CEP63Q96MT8 703 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 LYSMD1Q96S90 227 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 ZSCAN5AQ9BUG6 496 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 NUP85Q9BW27 656 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 WWP1Q9H0M0 922 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 SRMSQ9H3Y6 488 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 CHKBQ9Y259 395 aa11.36□□□□□ -0.59
USP11-208ENST00000480104 A0A1B0GX78 115 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 PRLP01236 227 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 ZNF24P17028 368 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 BMP7P18075 431 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 EEF1DP29692 281 aaKnown RBP11.35□□□□□ -0.59
USP11-208ENST00000480104 HTR7P34969 479 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 GCGRP47871 477 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 RAB28P51157 221 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 IHHQ14623 411 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 FLYWCH1Q4VC44 716 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 ANKRD20A8PQ5CZ79 823 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 RNFT1Q5M7Z0 435 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 TIGD7Q6NT04 549 aaPredicted RBP11.35□□□□□ -0.59
USP11-208ENST00000480104 TRIM59Q8IWR1 403 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 TRAM1L1Q8N609 369 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 MDS2Q8NDY4 140 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 CCHCR1Q8TD31 782 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 LCN9Q8WX39 176 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 EID2BQ96D98 161 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 SIGLEC12Q96PQ1 595 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 C19orf24Q9BVV8 132 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 SGPP1Q9BX95 441 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 TAS2R14Q9NYV8 317 aa11.35□□□□□ -0.59
USP11-208ENST00000480104 APEX2Q9UBZ4 518 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms