RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 CLCN7P51798 805 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 KPNA2P52292 529 aaKnown RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 PLTPP55058 493 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 CDKN2DP55273 166 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 ARL4CP56559 192 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 RPA4Q13156 261 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 CUL1Q13616 776 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 THOC5Q13769 683 aaKnown RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 GBX1Q14549 363 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 WHAMMP3Q1A5X7 153 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 SYTL3Q4VX76 610 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 DNAJC21Q5F1R6 531 aaKnown RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 SPANXN3Q5MJ09 141 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 TEDDM1Q5T9Z0 273 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 C19orf48Q6RUI8 117 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 SDCCAG8Q86SQ7 713 aaPredicted RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 TRIM73Q86UV7 250 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 ZFAND4Q86XD8 727 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 ADGRF3Q8IZF5 1079 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 PDIK1LQ8N165 341 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 C2orf73Q8N5S3 287 aaPredicted RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 C2CD4AQ8NCU7 369 aaPredicted RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 FBXO25Q8TCJ0 367 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 ART4Q93070 314 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 CERS2Q96G23 380 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 MAP3K3Q99759 626 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 MENTQ9BUN1 341 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 KLHL25Q9H0H3 589 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 SIDT1Q9NXL6 827 aaKnown RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 WHRNQ9P202 907 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 GNPTGQ9UJJ9 305 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 RALYQ9UKM9 306 aaKnown RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 ASF1AQ9Y294 204 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 TDRKHQ9Y2W6 561 aaKnown RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 PCDHGA8Q9Y5G5 932 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 DSPP15924 2871 aaKnown RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 ITPR1Q14643 2758 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 CXorf49A8MYA2 514 aaPredicted RBP12.08□□□□□ -0.48
APTX-220ENST00000476858 SLCO2B1O94956 709 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 AHSGP02765 367 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 PVRP15151 417 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 PAMP19021 973 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 SSTR1P30872 391 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 CD151P48509 253 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 GPX6P59796 221 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 ANKS6Q68DC2 871 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 FAM129CQ86XR2 697 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 ZBED8Q8IZ13 594 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 LINC01555Q8NAE3 123 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 FLVCR1-AS1Q8TAF5 88 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 TMEM159Q96B96 161 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 TRIM44Q96DX7 344 aaPredicted RBP12.08□□□□□ -0.48
APTX-220ENST00000476858 TCF12Q99081 682 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 STRADBQ9C0K7 418 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 VPS37BQ9H9H4 285 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 SAYSD1Q9NPB0 183 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 ZDHHC18Q9NUE0 388 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 HRASLS2Q9NWW9 162 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 B3GALT1Q9Y5Z6 326 aa12.08□□□□□ -0.48
APTX-220ENST00000476858 TEX51A0A1B0GUA7 166 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 KLHL33A6NCF5 533 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 TMEM8BA6NDV4 472 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 QSOX1O00391 747 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 IFRD1O00458 451 aaPredicted RBP12.07□□□□□ -0.48
APTX-220ENST00000476858 HCRTR1O43613 425 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 TIAF1O95411 115 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 CTSBP07858 339 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 JMJD7P0C870 316 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 CHRM3P20309 590 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 GMPRP36959 345 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 YBX1P67809 324 aaKnown RBP12.07□□□□□ -0.48
APTX-220ENST00000476858 CKAP4Q07065 602 aaKnown RBP12.07□□□□□ -0.48
APTX-220ENST00000476858 KRT33BQ14525 404 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 CLPPQ16740 277 aaPredicted RBP12.07□□□□□ -0.48
APTX-220ENST00000476858 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.07□□□□□ -0.48
APTX-220ENST00000476858 CACHD1Q5VU97 1274 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 MAATS1Q7Z4T9 603 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 CLEC14AQ86T13 490 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 TAX1BP1Q86VP1 789 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 LRRC6Q86X45 466 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 CNTN4Q8IWV2 1026 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 RBM12BQ8IXT5 1001 aaKnown RBP12.07□□□□□ -0.48
APTX-220ENST00000476858 MMGT1Q8N4V1 131 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 ZBTB2Q8N680 514 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 SNIP1Q8TAD8 396 aaKnown RBP12.07□□□□□ -0.48
APTX-220ENST00000476858 CD200R1Q8TD46 325 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 HNRNPLLQ8WVV9 542 aaKnown RBP12.07□□□□□ -0.48
APTX-220ENST00000476858 LCN9Q8WX39 176 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 ELMO2Q96JJ3 720 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 TTC1Q99614 292 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 GPR21Q99679 349 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 OLFM1Q99784 485 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 AARSD1Q9BTE6 412 aaKnown RBP12.07□□□□□ -0.48
APTX-220ENST00000476858 TWSG1Q9GZX9 223 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 MVB12BQ9H7P6 319 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 INTS10Q9NVR2 710 aaKnown RBP12.07□□□□□ -0.48
APTX-220ENST00000476858 EPHA6Q9UF33 1036 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 IKZF3Q9UKT9 509 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 KLHL20Q9Y2M5 609 aa12.07□□□□□ -0.48
APTX-220ENST00000476858 NBEAQ8NFP9 2946 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms