RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 TRIB3Q96RU7 358 aa19.66■□□□□ 0.74
APP-215ENST00000474136 ERP44Q9BS26 406 aa19.66■□□□□ 0.74
APP-215ENST00000474136 ADGRE3Q9BY15 652 aa19.66■□□□□ 0.74
APP-215ENST00000474136 NFKBIL1Q9UBC1 381 aaPredicted RBP19.66■□□□□ 0.74
APP-215ENST00000474136 ZNF711Q9Y462 761 aa19.66■□□□□ 0.74
APP-215ENST00000474136 PCSK5Q92824 1860 aa19.66■□□□□ 0.74
APP-215ENST00000474136 IFNB1P01574 187 aa19.65■□□□□ 0.74
APP-215ENST00000474136 CAPN1P07384 714 aa19.65■□□□□ 0.74
APP-215ENST00000474136 RAB40ALP0C0E4 278 aa19.65■□□□□ 0.74
APP-215ENST00000474136 CDK18Q07002 472 aa19.65■□□□□ 0.74
APP-215ENST00000474136 ABRQ12979 859 aa19.65■□□□□ 0.74
APP-215ENST00000474136 TEX44Q53QW1 395 aa19.65■□□□□ 0.74
APP-215ENST00000474136 KLHL35Q6PF15 583 aa19.65■□□□□ 0.74
APP-215ENST00000474136 FAM83HQ6ZRV2 1179 aaPredicted RBP19.65■□□□□ 0.74
APP-215ENST00000474136 MED25Q71SY5 747 aa19.65■□□□□ 0.74
APP-215ENST00000474136 DSELQ8IZU8 1212 aa19.65■□□□□ 0.74
APP-215ENST00000474136 CNTD1Q8N815 330 aa19.65■□□□□ 0.74
APP-215ENST00000474136 TMEM102Q8N9M5 508 aaPredicted RBP19.65■□□□□ 0.74
APP-215ENST00000474136 NLNQ9BYT8 704 aa19.65■□□□□ 0.74
APP-215ENST00000474136 FBN2P35556 2912 aa19.65■□□□□ 0.74
APP-215ENST00000474136 OR5K3A6NET4 321 aa19.64■□□□□ 0.73
APP-215ENST00000474136 KCNK1O00180 336 aa19.64■□□□□ 0.73
APP-215ENST00000474136 VCLP18206 1134 aa19.64■□□□□ 0.73
APP-215ENST00000474136 ARCN1P48444 511 aaKnown RBP19.64■□□□□ 0.73
APP-215ENST00000474136 TMEM115Q12893 351 aaPredicted RBP19.64■□□□□ 0.73
APP-215ENST00000474136 ZBTB17Q13105 803 aa19.64■□□□□ 0.73
APP-215ENST00000474136 KYNUQ16719 465 aa19.64■□□□□ 0.73
APP-215ENST00000474136 ITPRIPL1Q6GPH6 555 aa19.64■□□□□ 0.73
APP-215ENST00000474136 FAM198BQ6UWH4 519 aa19.64■□□□□ 0.73
APP-215ENST00000474136 PCGF5Q86SE9 256 aa19.64■□□□□ 0.73
APP-215ENST00000474136 IFT20Q8IY31 132 aa19.64■□□□□ 0.73
APP-215ENST00000474136 SPATA13Q96N96 652 aa19.64■□□□□ 0.73
APP-215ENST00000474136 LRFN5Q96NI6 719 aa19.64■□□□□ 0.73
APP-215ENST00000474136 CD180Q99467 661 aa19.64■□□□□ 0.73
APP-215ENST00000474136 GPR63Q9BZJ6 419 aa19.64■□□□□ 0.73
APP-215ENST00000474136 FAM129AQ9BZQ8 928 aa19.64■□□□□ 0.73
APP-215ENST00000474136 BPIFA1Q9NP55 256 aa19.64■□□□□ 0.73
APP-215ENST00000474136 RAD18Q9NS91 495 aa19.64■□□□□ 0.73
APP-215ENST00000474136 HRASLS2Q9NWW9 162 aa19.64■□□□□ 0.73
APP-215ENST00000474136 ASIC3Q9UHC3 531 aa19.64■□□□□ 0.73
APP-215ENST00000474136 NEU2Q9Y3R4 380 aa19.64■□□□□ 0.73
APP-215ENST00000474136 CFAP20Q9Y6A4 193 aaKnown RBP19.64■□□□□ 0.73
APP-215ENST00000474136 SMAPO00193 183 aa19.63■□□□□ 0.73
APP-215ENST00000474136 AURKAO14965 403 aa19.63■□□□□ 0.73
APP-215ENST00000474136 SPTBP11277 2137 aa19.63■□□□□ 0.73
APP-215ENST00000474136 RORAP35398 523 aa19.63■□□□□ 0.73
APP-215ENST00000474136 TERF1P54274 439 aa19.63■□□□□ 0.73
APP-215ENST00000474136 ATP13A5Q4VNC0 1218 aa19.63■□□□□ 0.73
APP-215ENST00000474136 VWA5B1Q5TIE3 1220 aa19.63■□□□□ 0.73
APP-215ENST00000474136 OTOGQ6ZRI0 2925 aa19.63■□□□□ 0.73
APP-215ENST00000474136 ARHGEF18Q6ZSZ5 1173 aa19.63■□□□□ 0.73
APP-215ENST00000474136 LRRN4CLQ8ND94 238 aa19.63■□□□□ 0.73
APP-215ENST00000474136 OR8K5Q8NH50 307 aa19.63■□□□□ 0.73
APP-215ENST00000474136 GDAP1Q8TB36 358 aa19.63■□□□□ 0.73
APP-215ENST00000474136 INPP5DQ92835 1189 aa19.63■□□□□ 0.73
APP-215ENST00000474136 CLIP3Q96DZ5 547 aa19.63■□□□□ 0.73
APP-215ENST00000474136 CEP41Q9BYV8 373 aa19.63■□□□□ 0.73
APP-215ENST00000474136 MAGEE1Q9HCI5 957 aa19.63■□□□□ 0.73
APP-215ENST00000474136 LATS2Q9NRM7 1088 aa19.63■□□□□ 0.73
APP-215ENST00000474136 FAM114A2Q9NRY5 505 aa19.63■□□□□ 0.73
APP-215ENST00000474136 IMP3Q9NV31 184 aaKnown RBP19.63■□□□□ 0.73
APP-215ENST00000474136 SOHLH2Q9NX45 425 aa19.63■□□□□ 0.73
APP-215ENST00000474136 B3GNT3Q9Y2A9 372 aa19.63■□□□□ 0.73
APP-215ENST00000474136 NTNG1Q9Y2I2 539 aa19.63■□□□□ 0.73
APP-215ENST00000474136 C2CD3Q4AC94 2353 aa19.63■□□□□ 0.73
APP-215ENST00000474136 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.62■□□□□ 0.73
APP-215ENST00000474136 ARHGAP10A1A4S6 786 aa19.62■□□□□ 0.73
APP-215ENST00000474136 POP7O75817 140 aaKnown RBP19.62■□□□□ 0.73
APP-215ENST00000474136 ZBTB11O95625 1053 aaPredicted RBP19.62■□□□□ 0.73
APP-215ENST00000474136 RHOXF2BP0C7M4 288 aa19.62■□□□□ 0.73
APP-215ENST00000474136 PTPN3P26045 913 aa19.62■□□□□ 0.73
APP-215ENST00000474136 CA5AP35218 305 aa19.62■□□□□ 0.73
APP-215ENST00000474136 FDFT1P37268 417 aa19.62■□□□□ 0.73
APP-215ENST00000474136 KPNA2P52292 529 aaKnown RBP19.62■□□□□ 0.73
APP-215ENST00000474136 CTSCP53634 463 aa19.62■□□□□ 0.73
APP-215ENST00000474136 RRADP55042 308 aa19.62■□□□□ 0.73
APP-215ENST00000474136 WASHC5Q12768 1159 aa19.62■□□□□ 0.73
APP-215ENST00000474136 GTF2H3Q13889 308 aa19.62■□□□□ 0.73
APP-215ENST00000474136 ELOAQ14241 798 aaKnown RBP19.62■□□□□ 0.73
APP-215ENST00000474136 NFE2L1Q14494 772 aa19.62■□□□□ 0.73
APP-215ENST00000474136 PCSK7Q16549 785 aa19.62■□□□□ 0.73
APP-215ENST00000474136 PARP6Q2NL67 630 aa19.62■□□□□ 0.73
APP-215ENST00000474136 PTCHD3Q3KNS1 767 aa19.62■□□□□ 0.73
APP-215ENST00000474136 ANKRD20A2Q5SQ80 823 aa19.62■□□□□ 0.73
APP-215ENST00000474136 ANKRD20A1Q5TYW2 823 aa19.62■□□□□ 0.73
APP-215ENST00000474136 ANKRD20A3Q5VUR7 823 aa19.62■□□□□ 0.73
APP-215ENST00000474136 DUS1LQ6P1R4 473 aaKnown RBP19.62■□□□□ 0.73
APP-215ENST00000474136 PID1Q7Z2X4 250 aa19.62■□□□□ 0.73
APP-215ENST00000474136 AMZ2Q86W34 360 aa19.62■□□□□ 0.73
APP-215ENST00000474136 EIF1ADQ8N9N8 165 aaKnown RBP19.62■□□□□ 0.73
APP-215ENST00000474136 CPT1BQ92523 772 aa19.62■□□□□ 0.73
APP-215ENST00000474136 MARVELD3Q96A59 401 aa19.62■□□□□ 0.73
APP-215ENST00000474136 TEKT5Q96M29 485 aa19.62■□□□□ 0.73
APP-215ENST00000474136 VPS35Q96QK1 796 aa19.62■□□□□ 0.73
APP-215ENST00000474136 RHOXF2Q9BQY4 288 aa19.62■□□□□ 0.73
APP-215ENST00000474136 IGSF5Q9NSI5 407 aa19.62■□□□□ 0.73
APP-215ENST00000474136 PCMTD2Q9NV79 361 aa19.62■□□□□ 0.73
APP-215ENST00000474136 C5AR2Q9P296 337 aa19.62■□□□□ 0.73
APP-215ENST00000474136 KLHL8Q9P2G9 620 aaPredicted RBP19.62■□□□□ 0.73
APP-215ENST00000474136 SPO11Q9Y5K1 396 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms