RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 PHC3Q8NDX5 983 aa12.65□□□□□ -0.38
PTPN7-207ENST00000468385 OR13C4Q8NGS5 318 aa12.65□□□□□ -0.38
PTPN7-207ENST00000468385 P3H4Q92791 437 aa12.65□□□□□ -0.38
PTPN7-207ENST00000468385 HAUS1Q96CS2 278 aa12.65□□□□□ -0.38
PTPN7-207ENST00000468385 GBP5Q96PP8 586 aa12.65□□□□□ -0.38
PTPN7-207ENST00000468385 QKIQ96PU8 341 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTPN7-207ENST00000468385 DNAJC7Q99615 494 aa12.65□□□□□ -0.38
PTPN7-207ENST00000468385 C17orf62Q9BQA9 187 aa12.65□□□□□ -0.38
PTPN7-207ENST00000468385 FAM96AQ9H5X1 160 aa12.65□□□□□ -0.38
PTPN7-207ENST00000468385 XKR8Q9H6D3 395 aa12.65□□□□□ -0.38
PTPN7-207ENST00000468385 PTRH2Q9Y3E5 179 aaKnown RBP12.65□□□□□ -0.38
PTPN7-207ENST00000468385 PCDHGA10Q9Y5H3 936 aa12.65□□□□□ -0.38
PTPN7-207ENST00000468385 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.65□□□□□ -0.381e-7■■■■■ 27.3
PTPN7-207ENST00000468385 COPG1Q9Y678 874 aaKnown RBP12.65□□□□□ -0.38
PTPN7-207ENST00000468385 FER1L5A0AVI2 2057 aa12.65□□□□□ -0.39
PTPN7-207ENST00000468385 SEC16AO15027 2179 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 hCG_1818297A0A087WSY0 165 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 C5orf60A6NFR6 353 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 IFRD1O00458 451 aaPredicted RBP12.64□□□□□ -0.39
PTPN7-207ENST00000468385 PEX12O00623 359 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 ALPPP05187 535 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 CTSBP07858 339 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 TNFRSF8P28908 595 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 ADRA1AP35348 466 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 FOLR3P41439 243 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 CD151P48509 253 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 GEMP55040 296 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 SOX8P57073 446 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 FOXL2P58012 376 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 ELOAQ14241 798 aaKnown RBP12.64□□□□□ -0.39
PTPN7-207ENST00000468385 ZIC1Q15915 447 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 DEFB110Q30KQ9 67 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 MRPL14Q6P1L8 145 aaKnown RBP12.64□□□□□ -0.39
PTPN7-207ENST00000468385 SARM1Q6SZW1 724 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 SPESP1Q6UW49 350 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 RANBP10Q6VN20 620 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 MICALCLQ6ZW33 695 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 PPP1R32Q7Z5V6 425 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 SNX20Q7Z614 316 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 TRIM73Q86UV7 250 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 GPR135Q8IZ08 494 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 NXPE1Q8N323 547 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 C19orf47Q8N9M1 422 aaKnown RBP12.64□□□□□ -0.39
PTPN7-207ENST00000468385 OR8K1Q8NGG5 319 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 OR2Y1Q8NGV0 311 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 UBE2Q2Q8WVN8 375 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 ULK4Q96C45 1275 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 COPS8Q99627 209 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 CHP1Q99653 195 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 APOL2Q9BQE5 337 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 HGH1Q9BTY7 390 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 SPRTNQ9H040 489 aaPredicted RBP12.64□□□□□ -0.39
PTPN7-207ENST00000468385 GBA3Q9H227 469 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 MVB12BQ9H7P6 319 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 SPTLC3Q9NUV7 552 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 P4HTMQ9NXG6 502 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 TRHDEQ9UKU6 1024 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 ICKQ9UPZ9 632 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 AP1M2Q9Y6Q5 423 aa12.64□□□□□ -0.39
PTPN7-207ENST00000468385 IGLV3-16A0A075B6K0 115 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 HACD1B0YJ81 288 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 CFAP99D6REC4 459 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 PSTPIP1O43586 416 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 SPOPO43791 374 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 KLHL41O60662 606 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 OR2B3O76000 313 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 IPO13O94829 963 aaKnown RBP12.63□□□□□ -0.39
PTPN7-207ENST00000468385 IGHEP01854 428 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 UMODP07911 640 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 RBL1P28749 1068 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 GLRBP48167 497 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 CDKN1CP49918 316 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-207ENST00000468385 ZNF140P52738 457 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-207ENST00000468385 DCDP81605 110 aaKnown RBP12.63□□□□□ -0.39
PTPN7-207ENST00000468385 TMPRSS15P98073 1019 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 PRKG2Q13237 762 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 BOP1Q14137 746 aaKnown RBP12.63□□□□□ -0.39
PTPN7-207ENST00000468385 TCEAL1Q15170 157 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 TFDP3Q5H9I0 405 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 ZADH2Q8N4Q0 377 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 ST6GALNAC3Q8NDV1 305 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 FLVCR1-AS1Q8TAF5 88 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 PROKR1Q8TCW9 393 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 HEXDCQ8WVB3 486 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 TM9SF4Q92544 642 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 TFGQ92734 400 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-207ENST00000468385 CHRNA10Q9GZZ6 450 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 C10orf88Q9H8K7 445 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 ZDHHC3Q9NYG2 299 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 IFT80Q9P2H3 777 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-207ENST00000468385 DHCR7Q9UBM7 475 aaKnown RBP12.63□□□□□ -0.39
PTPN7-207ENST00000468385 GPN3Q9UHW5 284 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-207ENST00000468385 CDYLQ9Y232 598 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 CSAG2Q9Y5P2 127 aa12.63□□□□□ -0.39
PTPN7-207ENST00000468385 SYCE3A1L190 88 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 CCL22O00626 93 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 ANXA9O76027 345 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 CRTAMO95727 393 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 CD63P08962 238 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 UGT2B7P16662 529 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms