RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 KCNJ13O60928 360 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 PDHA1P08559 390 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 CARSP49589 748 aaKnown RBP12.79□□□□□ -0.36
C9orf3-211ENST00000463372 DEFB110Q30KQ9 67 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 CCDC14Q49A88 953 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 FILIP1LQ4L180 1135 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 C2CD6Q53TS8 623 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 TXNRD3NBQ6F5E7 133 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 RIPOR1Q6ZS17 1223 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 HIPK1Q86Z02 1210 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 OR10Q1Q8NGQ4 319 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 DLG3Q92796 817 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 C8orf44Q96CB5 159 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 CRB3Q9BUF7 120 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 DEF6Q9H4E7 631 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 KIR3DX1Q9H7L2 352 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 METTL5Q9NRN9 209 aaKnown RBP12.79□□□□□ -0.36
C9orf3-211ENST00000463372 ADGRE2Q9UHX3 823 aa12.79□□□□□ -0.36
C9orf3-211ENST00000463372 SNRNP200O75643 2136 aaKnown RBP12.79□□□□□ -0.36
C9orf3-211ENST00000463372 C1orf232A0A0U1RR37 186 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 ZNF24P17028 368 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 MX2P20592 715 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 RFC1P35251 1148 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-211ENST00000463372 NUP107P57740 925 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 TPI1P60174 286 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 AP2B1P63010 937 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 TMPRSS15P98073 1019 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 DAZAP2Q15038 168 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-211ENST00000463372 RALGPS1Q5JS13 557 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 RESP18Q5W5W9 173 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 SMYD5Q6GMV2 418 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 HEPHL1Q6MZM0 1159 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 KRBA2Q6ZNG9 492 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 ARHGAP36Q6ZRI8 547 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 NEK10Q6ZWH5 1172 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 HOOK3Q86VS8 718 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 BBS5Q8N3I7 341 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 TMEM178AQ8NBL3 297 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 MSANTD4Q8NCY6 345 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 CCHCR1Q8TD31 782 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 FAM172AQ8WUF8 416 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 RXFP2Q8WXD0 754 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 MESP1Q9BRJ9 268 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 DTLQ9NZJ0 730 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 GNPTGQ9UJJ9 305 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 ZNF407Q9C0G0 2248 aa12.78□□□□□ -0.36
C9orf3-211ENST00000463372 A0A1B0GX78 115 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 RGSL1A5PLK6 1076 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 MTX2O75431 263 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 UQCRC1P31930 480 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 ZFP36L2P47974 494 aaKnown RBP12.77□□□□□ -0.37
C9orf3-211ENST00000463372 GTF2H3Q13889 308 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 KRT33BQ14525 404 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 CHRFAM7AQ494W8 412 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 CCDC40Q4G0X9 1142 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 VWA3BQ502W6 1294 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 TTLL10Q6ZVT0 673 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 AMZ2Q86W34 360 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 MCATQ8IVS2 390 aaKnown RBP12.77□□□□□ -0.37
C9orf3-211ENST00000463372 RPRMLQ8N4K4 120 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 GPT2Q8TD30 523 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 DENND1AQ8TEH3 1009 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 GLYATL1Q969I3 302 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 FAM81BQ96LP2 452 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 ZNF599Q96NL3 588 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 ZSCAN5AQ9BUG6 496 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 SRMSQ9H3Y6 488 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 ZNF281Q9Y2X9 895 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 HRH3Q9Y5N1 445 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 ALG6Q9Y672 507 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 USF3Q68DE3 2245 aa12.77□□□□□ -0.37
C9orf3-211ENST00000463372 NBEAL2Q6ZNJ1 2754 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 A0A1B0GTH9 108 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 CES2O00748 559 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 YEATS4O95619 227 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 ITGAMP11215 1152 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 COX6A1P12074 109 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 CD46P15529 392 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 PTGER1P34995 402 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 PTPN9P43378 593 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 MAXP61244 160 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 ANKRD20A8PQ5CZ79 823 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 SCYL2Q6P3W7 929 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-211ENST00000463372 SMYD4Q8IYR2 804 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-211ENST00000463372 PGBD5Q8N414 524 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 C19orf47Q8N9M1 422 aaKnown RBP12.76□□□□□ -0.37
C9orf3-211ENST00000463372 OR5M3Q8NGP4 307 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 TMEM125Q96AQ2 219 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 C12orf66Q96MD2 445 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 ZNF396Q96N95 335 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-211ENST00000463372 MGME1Q9BQP7 344 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 HES7Q9BYE0 225 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 FAM60AQ9NP50 221 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 CTSFQ9UBX1 484 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 COLEC10Q9Y6Z7 277 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 SVEP1Q4LDE5 3571 aa12.76□□□□□ -0.37
C9orf3-211ENST00000463372 GTPBP10A4D1E9 387 aaKnown RBP12.75□□□□□ -0.37
C9orf3-211ENST00000463372 FZD6O60353 706 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 CNOT4O95628 575 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms