RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	SAYSD1	Q9NPB0	183 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	INTS10	Q9NVR2	710 aa	Known RBP	9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	HRASLS2	Q9NWW9	162 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	OCIAD1	Q9NX40	245 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	SLC39A1	Q9NY26	324 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	WHRN	Q9P202	907 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	SLC17A6	Q9P2U8	582 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	RUVBL2	Q9Y230	463 aa	Known RBP	9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	AHCTF1	Q8WYP5	2266 aa		9.36	□□□□□ -0.91
PSMD4-208	ENST00000462970	SNRNP200	O75643	2136 aa	Known RBP	9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	KMT2B	Q9UMN6	2715 aa	Predicted RBP	9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	ESYT3	A0FGR9	886 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	CTAGE15	A4D2H0	777 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	TAF4	O00268	1085 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	KPNA5	O15131	536 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	RRP8	O43159	456 aa	Known RBP	9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	TLX3	O43711	291 aa	Predicted RBP	9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	PRAMEF10	O60809	474 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	TUBB4A	P04350	444 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	ITGA2B	P08514	1039 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	CTAGE8	P0CG41	777 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	SLC5A2	P31639	672 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	PCBP4	P57723	403 aa	Known RBP	9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	PLOD1	Q02809	727 aa	Predicted RBP	9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	FASTKD3	Q14CZ7	662 aa	Known RBP	9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	TMEM164	Q5U3C3	297 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	DUPD1	Q68J44	220 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	TTC23L	Q6PF05	361 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	CNST	Q6PJW8	725 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	C19orf48	Q6RUI8	117 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	LRRC69	Q6ZNQ3	347 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	ZNF572	Q7Z3I7	529 aa	Predicted RBP	9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	CTAGE6	Q86UF2	777 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	CTAGE4	Q8IX94	777 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	PALM2	Q8IXS6	379 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	LMNTD2	Q8IXW0	634 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	SLC22A15	Q8IZD6	547 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	ZBTB2	Q8N680	514 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	SIDT2	Q8NBJ9	832 aa	Known RBP	9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	OR52E1	Q8NGJ3	308 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	HNRNPLL	Q8WVV9	542 aa	Known RBP	9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	ZFPM2	Q8WW38	1151 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	CERS2	Q96G23	380 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	ELMO2	Q96JJ3	720 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	ZNF578	Q96N58	590 aa	Predicted RBP	9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	FOPNL	Q96NB1	174 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	BIRC8	Q96P09	236 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	NDN	Q99608	321 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	LRRC1	Q9BTT6	524 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	ASCL3	Q9NQ33	180 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	SOHLH2	Q9NX45	425 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	GRHL1	Q9NZI5	618 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	PCDHGA8	Q9Y5G5	932 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	MRFAP1	Q9Y605	127 aa		9.35	□□□□□ -0.91
PSMD4-208	ENST00000462970	PCM1	Q15154	2024 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	MN1	Q10571	1320 aa	Predicted RBP	9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	OR5K3	A6NET4	321 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	BTN3A1	O00481	513 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	KDM1A	O60341	852 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	VPS26A	O75436	327 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	HAUS5	O94927	633 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	RPN2	P04844	631 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	FGF3	P11487	239 aa	Predicted RBP	9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	SAT1	P21673	171 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	CDH3	P22223	829 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	ACADL	P28330	430 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	EIF2S3	P41091	472 aa	Known RBP	9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	BDKRB1	P46663	353 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	GUCY2D	Q02846	1103 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	CUL1	Q13616	776 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	TRADD	Q15628	312 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	TTLL9	Q3SXZ7	439 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	PLEKHS1	Q5SXH7	462 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	ANKS6	Q68DC2	871 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	TRMT10B	Q6PF06	316 aa	Known RBP	9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	FBXO38	Q6PIJ6	1188 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	ARHGAP22	Q7Z5H3	698 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	TAX1BP1	Q86VP1	789 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	AMIGO1	Q86WK6	493 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	ZFAND4	Q86XD8	727 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	SPNS2	Q8IVW8	549 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	TBC1D21	Q8IYX1	336 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	C2orf73	Q8N5S3	287 aa	Predicted RBP	9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	GPATCH11	Q8N954	259 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	PYROXD1	Q8WU10	500 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	KCNE4	Q8WWG9	221 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	LRRC39	Q96DD0	335 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	MAP3K3	Q99759	626 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	KLHL25	Q9H0H3	589 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	FOXJ2	Q9P0K8	574 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	ZFAT	Q9P243	1243 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	GALP	Q9UBC7	116 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	DKK4	Q9UBT3	224 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	POLG2	Q9UHN1	485 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	SLC39A10	Q9ULF5	831 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	ICK	Q9UPZ9	632 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	CDYL	Q9Y232	598 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	NFS1	Q9Y697	457 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	TEX264	Q9Y6I9	313 aa		9.34	□□□□□ -0.91
PSMD4-208	ENST00000462970	SDK2	Q58EX2	2172 aa		9.34	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms