RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 PPM1NQ8N819 430 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 OR52E1Q8NGJ3 308 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 OR5AR1Q8NGP9 310 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 GIMAP7Q8NHV1 300 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 MAGEC3Q8TD91 643 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 LCN9Q8WX39 176 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ATXN7L3BQ96GX2 97 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 VPS39Q96JC1 886 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 RBBP8Q99708 897 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 SLC30A3Q99726 388 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 NUDT22Q9BRQ3 303 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 MCMBPQ9BTE3 642 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 HGH1Q9BTY7 390 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 RAB33BQ9H082 229 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 TFB2MQ9H5Q4 396 aaKnown RBP11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ACSS3Q9H6R3 686 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ANKZF1Q9H8Y5 726 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 RDH14Q9HBH5 336 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 GALPQ9UBC7 116 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 KLK13Q9UKR3 277 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ANGPTL2Q9UKU9 493 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ATXN7L1Q9ULK2 861 aaPredicted RBP11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 VWA7Q9Y334 891 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CEP295Q9C0D2 2601 aa11.35□□□□□ -0.59
TRAF3IP1-204ENST00000462122 RP1P56715 2156 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 MATN2O00339 956 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CASC3O15234 703 aaKnown RBP11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 PIAS1O75925 651 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 MATN4O95460 622 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ACSL3O95573 720 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 TOP3BO95985 862 aaKnown RBP11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ABHD2P08910 425 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 MPC1LP0DKB6 136 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 FDXRP22570 491 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 MCM3P25205 808 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CSF2RBP32927 897 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 SPRP35270 261 aaPredicted RBP11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 PDX1P52945 283 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 LIMK2P53671 638 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CDKN2DP55273 166 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 POU4F1Q01851 419 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ZFP36L1Q07352 338 aaKnown RBP11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ABRQ12979 859 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 EIF3IQ13347 325 aaKnown RBP11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 TRA2AQ13595 282 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 KLHL38Q2WGJ6 581 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CCNI2Q6ZMN8 369 aaPredicted RBP11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 USP53Q70EK8 1073 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 OOSP2Q86WS3 158 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 SLITRK4Q8IW52 837 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CPNE9Q8IYJ1 553 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 PHC3Q8NDX5 983 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CFAP61Q8NHU2 1237 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 NCSTNQ92542 709 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 UBXN4Q92575 508 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 RSC1A1Q92681 617 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 TSPAN17Q96FV3 270 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ZDHHC12Q96GR4 267 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 LIN37Q96GY3 246 aaPredicted RBP11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ELMO2Q96JJ3 720 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 STRADBQ9C0K7 418 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 SRMSQ9H3Y6 488 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 POPDC3Q9HBV1 291 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 OGFRQ9NZT2 677 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 EPHA6Q9UF33 1036 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 MSRB2Q9Y3D2 182 aa11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 MN1Q10571 1320 aaPredicted RBP11.34□□□□□ -0.59
TRAF3IP1-204ENST00000462122 A0A087WUV0 522 aaPredicted RBP11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 IGHV5-10-1A0A0J9YXX1 117 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 FAM149AA5PLN7 773 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 OR5K3A6NET4 321 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 HGSO14964 777 aaPredicted RBP11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 TOX3O15405 576 aaPredicted RBP11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 C1orf105O95561 183 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 C9P02748 559 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 CATP04040 527 aaKnown RBP11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 FAM153BP0C7A2 387 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 THRAP10827 490 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 TYRP1P17643 537 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 SHMT2P34897 504 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 SLC12A2P55011 1212 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 TIAL1Q01085 375 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 CFHR1Q03591 330 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 PRKAA1Q13131 559 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 PRKG2Q13237 762 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 FAM153CQ494X1 144 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 WDR93Q6P2C0 686 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 PAQR3Q6TCH7 311 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 TMPRSS9Q7Z410 1059 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 AMIGO1Q86WK6 493 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 MYO1HQ8N1T3 1032 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 RAB42Q8N4Z0 105 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 RAD51AP1Q96B01 352 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 GPR22Q99680 433 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 RAB11FIP5Q9BXF6 653 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 TXLNGYQ9BZA5 131 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 SYTL2Q9HCH5 934 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 HRASLS2Q9NWW9 162 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 OR6C2Q9NZP2 312 aa11.33□□□□□ -0.6
TRAF3IP1-204ENST00000462122 AKAP7Q9P0M2 348 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms