RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 IYDQ6PHW0 289 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 ISLR2Q6UXK2 745 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 CERS6Q6ZMG9 384 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 SIAH3Q8IW03 269 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 RBM12BQ8IXT5 1001 aaKnown RBP5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 LRRC17Q8N6Y2 441 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 MAPK1IP1LQ8NDC0 245 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 MYRIPQ8NFW9 859 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 PPP1R14CQ8TAE6 165 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 CXorf40AQ8TE69 158 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 FAM222BQ8WU58 562 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 MAGED4Q96JG8 741 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 CLIC6Q96NY7 704 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 TGM7Q96PF1 710 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 FRMD8Q9BZ67 464 aaPredicted RBP5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 TTYH3Q9C0H2 523 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 PCDH12Q9NPG4 1184 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 YAE1D1Q9NRH1 226 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 PLA2G3Q9NZ20 509 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 VPS28Q9UK41 221 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 CNOT6Q9ULM6 557 aaKnown RBP5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 SUFUQ9UMX1 484 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 ATP8A1Q9Y2Q0 1164 aa5.08□□□□□ -1.6
SBDSP1-204ENST00000453858 HERC1Q15751 4861 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF233A6NK53 670 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 ALG1L2C9J202 215 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 AGPSO00116 658 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 PEX12O00623 359 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 SPTLC2O15270 562 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 TGFB1I1O43294 461 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 SMPD2O60906 423 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 CNOT3O75175 753 aaKnown RBP5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 PMPCBO75439 489 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 SCRG1O75711 98 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 RASAL1O95294 804 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 MATN4O95460 622 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 JCHAINP01591 159 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 PCCBP05166 539 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 UMODP07911 640 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 FDPSP14324 419 aaKnown RBP5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 LSP1P33241 339 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 DDIT3P35638 169 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 GNPDA1P46926 289 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 PHC1P78364 1004 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 ORC2Q13416 577 aaPredicted RBP5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 TNK1Q13470 666 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 OLIG2Q13516 323 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 PEX6Q13608 980 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 C5orf22Q49AR2 442 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF789Q5FWF6 425 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 KRT79Q5XKE5 535 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 CD276Q5ZPR3 534 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 ATG9BQ674R7 924 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 FBXL22Q6P050 247 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 FBXO38Q6PIJ6 1188 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 LINC00696Q6ZRV3 163 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 SCML4Q8N228 414 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 GPD1LQ8N335 351 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 PCDH20Q8N6Y1 951 aaKnown RBP5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 CALML6Q8TD86 181 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 PSMF1Q92530 271 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 SYAP1Q96A49 352 aaPredicted RBP5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF501Q96CX3 271 aaPredicted RBP5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF514Q96K75 400 aaPredicted RBP5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 GBP4Q96PP9 640 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 MLPHQ9BV36 600 aaPredicted RBP5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 TRIM7Q9C029 511 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 EPS8L2Q9H6S3 715 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 UCK1Q9HA47 277 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 EPHA6Q9UF33 1036 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 SLC17A4Q9Y2C5 497 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 PMF1-BGLAPU3KQ54 211 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 DNAH7Q8WXX0 4024 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 NUP210LQ5VU65 1888 aa5.07□□□□□ -1.6
SBDSP1-204ENST00000453858 A0A0D9SEW6 157 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 LILRA5A6NI73 299 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF839A8K0R7 811 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 A8MV72 311 aaPredicted RBP5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 KCNU1A8MYU2 1149 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 GOLGA6L22H0YM25 854 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 SYT5O00445 386 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 LDB2O43679 373 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 ALOX12BO75342 701 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 CTDNEP1O95476 244 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 VNN1O95497 513 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 UGT2B4P06133 528 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 IVLP07476 585 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 EBLN1P0CF75 366 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF30P17039 623 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 CD40P25942 277 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 AOAHP28039 575 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 ACTR1BP42025 376 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 MAPK9P45984 424 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 CASP5P51878 434 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 CTSCP53634 463 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 SESN3P58005 492 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 FOXL2P58012 376 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 ANAPC15P60006 121 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 ACTR1AP61163 376 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms