RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 POLR1EQ9GZS1 481 aaKnown RBP12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 KLHL25Q9H0H3 589 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 KIR3DX1Q9H7L2 352 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 PCDH9Q9HC56 1237 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 NPDC1Q9NQX5 325 aaPredicted RBP12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 RAD18Q9NS91 495 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 SEPT11Q9NVA2 429 aaKnown RBP12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 TAB2Q9NYJ8 693 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 PLEKHA6Q9Y2H5 1048 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 ATRQ13535 2644 aa12.12□□□□□ -0.47
AC004540.1-204ENST00000449537 PES1O00541 588 aaKnown RBP12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 ZRANB2O95218 330 aaKnown RBP eCLIP12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 HOXD4P09016 255 aaPredicted RBP12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 PVRP15151 417 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 GSCP56915 257 aaPredicted RBP12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 DCDC1P59894 354 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 RPL7AP62424 266 aaKnown RBP12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 YBX1P67809 324 aaKnown RBP12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 TRIM14Q14142 442 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 KRT33BQ14525 404 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 IHHQ14623 411 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 TLDC1Q6P9B6 456 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 FAM83HQ6ZRV2 1179 aaPredicted RBP12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 OVCH1Q7RTY7 1134 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 CAMKMTQ7Z624 323 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 KBTBD2Q8IY47 623 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 ZNF655Q8N720 491 aaPredicted RBP12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 BEND7Q8N7W2 519 aaPredicted RBP12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 WFDC11Q8NEX6 87 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 BRSK1Q8TDC3 778 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 EID2BQ96D98 161 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 MRFAP1L1Q96HT8 127 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 C12orf66Q96MD2 445 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 GPR137Q96N19 417 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 PITPNM3Q9BZ71 974 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 SRMSQ9H3Y6 488 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 WDR54Q9H977 334 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 ZFYVE1Q9HBF4 777 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 RTN4Q9NQC3 1192 aaKnown RBP12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 SLC22A11Q9NSA0 550 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 STMN3Q9NZ72 180 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 PPT2Q9UMR5 302 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 LUC7L2Q9Y383 392 aaKnown RBP12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 DNMT3AQ9Y6K1 912 aaPredicted RBP12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 COLEC10Q9Y6Z7 277 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 HCFC1P51610 2035 aa12.11□□□□□ -0.47
AC004540.1-204ENST00000449537 ANKRD66B4E2M5 251 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 FAM227AF5H4B4 570 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 H3BMH7 237 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 ZSCAN9O15535 394 aaPredicted RBP12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 PRAMEF1O95521 474 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 HPP00738 406 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 ALBP02768 609 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 CALB1P05937 261 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 PIM1P11309 404 aaPredicted RBP12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 ABOP16442 354 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 ALAS2P22557 587 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 NDUFS1P28331 727 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 SOX11P35716 441 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 NSFP46459 744 aaKnown RBP12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 CDR2Q01850 454 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 DSC2Q02487 901 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 UBXN1Q04323 297 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 CACNG1Q06432 222 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 NFE2L1Q14494 772 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 QPCTQ16769 361 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 SLC5A12Q1EHB4 618 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 HSP90AA4PQ58FG1 418 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 FIGNQ5HY92 759 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 METRNLQ641Q3 311 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 DOLPP1Q86YN1 238 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 FAM20CQ8IXL6 584 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 ATPAF2Q8N5M1 289 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 TEX26Q8N6G2 289 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 ACRBPQ8NEB7 543 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 GDAP1Q8TB36 358 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 PSMF1Q92530 271 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 FKBP10Q96AY3 582 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 MCEEQ96PE7 176 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 DMRTA2Q96SC8 542 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 WWP1Q9H0M0 922 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 ZNF160Q9HCG1 818 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 KCNJ16Q9NPI9 418 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 ZNF358Q9NW07 568 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 IRAK4Q9NWZ3 460 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 CWC15Q9P013 229 aaKnown RBP12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 PCSK1NQ9UHG2 260 aa12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 NOCTQ9UK39 431 aaKnown RBP12.1□□□□□ -0.47
AC004540.1-204ENST00000449537 PRPSAP2O60256 369 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 LY6G6DO95868 133 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 WDPCPO95876 746 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 UQCRHP07919 91 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 CHRNB2P17787 502 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 CDC25BP30305 580 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 ZNF135P52742 658 aaPredicted RBP12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 PMP22Q01453 160 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 FMO1Q01740 532 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 DPYSQ14117 519 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 NKG7Q16617 165 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 DPY19L2P1Q6NXN4 242 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms