RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 CEACAM20Q6UY09 585 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 FAM92BQ6ZTR7 304 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 PRSS42Q7Z5A4 293 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 KCNMB4Q86W47 210 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 CILP2Q8IUL8 1156 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 ZBED8Q8IZ13 594 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 CARFQ8N187 725 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 AGGF1Q8N302 714 aaeCLIP15.94■□□□□ 0.147e-6■■■■□ 19.5
SF3A1-204ENST00000447376 OR4E2Q8NGC2 313 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 PYROXD1Q8WU10 500 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 HNRNPLLQ8WVV9 542 aaKnown RBP15.94■□□□□ 0.14
SF3A1-204ENST00000447376 JPH3Q8WXH2 748 aaPredicted RBP15.94■□□□□ 0.14
SF3A1-204ENST00000447376 SEC14L1Q92503 715 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 CFAP36Q96G28 342 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 PWWP2AQ96N64 755 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 DDA1Q9BW61 102 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 TSPYL1Q9H0U9 437 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 P2RY12Q9H244 342 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 ZNF768Q9H5H4 540 aaKnown RBP15.94■□□□□ 0.14
SF3A1-204ENST00000447376 L2HGDHQ9H9P8 463 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 MTRF1LQ9UGC7 380 aaKnown RBP15.94■□□□□ 0.14
SF3A1-204ENST00000447376 CHMP2BQ9UQN3 213 aa15.94■□□□□ 0.14
SF3A1-204ENST00000447376 TDRKHQ9Y2W6 561 aaKnown RBP15.94■□□□□ 0.14
SF3A1-204ENST00000447376 EPG5Q9HCE0 2579 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 GSAPA4D1B5 854 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 TLCD2A6NGC4 264 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 POLR1CO15160 346 aaPredicted RBP15.93■□□□□ 0.14
SF3A1-204ENST00000447376 KLK10O43240 276 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 BANF1O75531 89 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 FGF3P11487 239 aaPredicted RBP15.93■□□□□ 0.14
SF3A1-204ENST00000447376 CHRM3P20309 590 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 AOAHP28039 575 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 CCR7P32248 378 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 SHMT2P34897 504 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 ETV5P41161 510 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 LEPRP48357 1165 aaKnown RBP15.93■□□□□ 0.14
SF3A1-204ENST00000447376 ADARP55265 1226 aaKnown RBP15.93■□□□□ 0.14
SF3A1-204ENST00000447376 FOXM1Q08050 763 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 PRKG2Q13237 762 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 HP1BP3Q5SSJ5 553 aaPredicted RBP15.93■□□□□ 0.14
SF3A1-204ENST00000447376 PLEKHS1Q5SXH7 462 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 TMTC4Q5T4D3 741 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 NAPRTQ6XQN6 538 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 AMIGO1Q86WK6 493 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 KMT5CQ86Y97 462 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 ANKMY2Q8IV38 441 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 PALM2Q8IXS6 379 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 SLC22A15Q8IZD6 547 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 KRT222Q8N1A0 295 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 RAB42Q8N4Z0 105 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 PHC3Q8NDX5 983 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 FBXO36Q8NEA4 188 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 OR5K2Q8NHB8 316 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 FBXO25Q8TCJ0 367 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 LPGAT1Q92604 370 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 TRIM56Q9BRZ2 755 aaKnown RBP15.93■□□□□ 0.14
SF3A1-204ENST00000447376 TFB2MQ9H5Q4 396 aaKnown RBP15.93■□□□□ 0.14
SF3A1-204ENST00000447376 SAYSD1Q9NPB0 183 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 PPANQ9NQ55 473 aaKnown RBP15.93■□□□□ 0.14
SF3A1-204ENST00000447376 CRYL1Q9Y2S2 319 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 PCDHGA3Q9Y5H0 932 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 COMMD10Q9Y6G5 202 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 PIKFYVEQ9Y2I7 2098 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 ACACAQ13085 2346 aa15.93■□□□□ 0.14
SF3A1-204ENST00000447376 ESYT3A0FGR9 886 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 IQCF5A8MTL0 148 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 C2orf74A8MZ97 194 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 STMND1H3BQB6 276 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 LIPCP11150 499 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 PKMP14618 531 aaKnown RBP15.92■□□□□ 0.14
SF3A1-204ENST00000447376 POLR2CP19387 275 aaPredicted RBP15.92■□□□□ 0.14
SF3A1-204ENST00000447376 CDH3P22223 829 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 ATP1A2P50993 1020 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 MC2RQ01718 297 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 TTLL9Q3SXZ7 439 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 HSP90AA5PQ58FG0 334 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 XKR5Q6UX68 686 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 UNC5DQ6UXZ4 953 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 CCDC25Q86WR0 208 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 IGDCC3Q8IVU1 814 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 IFT20Q8IY31 132 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 SIDT2Q8NBJ9 832 aaKnown RBP15.92■□□□□ 0.14
SF3A1-204ENST00000447376 OR52E1Q8NGJ3 308 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 OR5AR1Q8NGP9 310 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 CFAP61Q8NHU2 1237 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 FBXO8Q9NRD0 319 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 OCIAD1Q9NX40 245 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 ACSL6Q9UKU0 697 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 FREM2Q5SZK8 3169 aa15.92■□□□□ 0.14
SF3A1-204ENST00000447376 KIF26BQ2KJY2 2108 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 USP24Q9UPU5 2620 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 WDFY3Q8IZQ1 3526 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 GPC4O75487 556 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 TMPRSS3P57727 454 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 TUBB4BP68371 445 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 CUL1Q13616 776 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 FRG1Q14331 258 aaKnown RBP15.91■□□□□ 0.14
SF3A1-204ENST00000447376 STEAP4Q687X5 459 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 ZDHHC24Q6UX98 284 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 UNC5AQ6ZN44 842 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms