RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 SPDYE1Q8NFV5 336 aaPredicted RBP22.45■■□□□ 1.19
CPSF4-204ENST00000436336 OR6Y1Q8NGX8 325 aa22.45■■□□□ 1.19
CPSF4-204ENST00000436336 GPBAR1Q8TDU6 330 aa22.45■■□□□ 1.19
CPSF4-204ENST00000436336 RMDN2Q96LZ7 410 aa22.45■■□□□ 1.19
CPSF4-204ENST00000436336 DNAJC28Q9NX36 388 aa22.45■■□□□ 1.19
CPSF4-204ENST00000436336 ARHGEF33A8MVX0 844 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 STX16-NPEPL1H3BU86 382 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 STX16O14662 325 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 C1orf105O95561 183 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 GUCA1CO95843 209 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 CSF2P04141 144 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 SERPINE1P05121 402 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 ANXA5P08758 320 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 CTSEP14091 401 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 IMPDH1P20839 514 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 GRK2P25098 689 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 AK4P27144 223 aaPredicted RBP22.45■■□□□ 1.18
CPSF4-204ENST00000436336 ACTR1BP42025 376 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 ACTR1AP61163 376 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 WASH2PQ6VEQ5 465 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 ZCCHC23Q6ZST2 131 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 CCL4L1Q8NHW4 92 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 TFGQ92734 400 aaPredicted RBP22.45■■□□□ 1.18
CPSF4-204ENST00000436336 L3HYPDHQ96EM0 354 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 EGFL8Q99944 293 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 GATA5Q9BWX5 397 aaPredicted RBP22.45■■□□□ 1.18
CPSF4-204ENST00000436336 GSDMCQ9BYG8 508 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 TCEAL2Q9H3H9 227 aaPredicted RBP22.45■■□□□ 1.18
CPSF4-204ENST00000436336 WASH6PQ9NQA3 447 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 ARL15Q9NXU5 204 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 APOBEC3BQ9UH17 382 aaKnown RBP22.45■■□□□ 1.18
CPSF4-204ENST00000436336 PILRBQ9UKJ0 227 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 WDR37Q9Y2I8 494 aa22.45■■□□□ 1.18
CPSF4-204ENST00000436336 ATXN2Q99700 1313 aaKnown RBP22.45■■□□□ 1.18
CPSF4-204ENST00000436336 PRR33A8MZF0 331 aa22.44■■□□□ 1.18
CPSF4-204ENST00000436336 NME1P15531 152 aaKnown RBP22.44■■□□□ 1.18
CPSF4-204ENST00000436336 JUNDP17535 347 aa22.44■■□□□ 1.18
CPSF4-204ENST00000436336 SETDB1Q15047 1291 aa22.44■■□□□ 1.18
CPSF4-204ENST00000436336 UAP1L1Q3KQV9 507 aa22.44■■□□□ 1.18
CPSF4-204ENST00000436336 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.44■■□□□ 1.18
CPSF4-204ENST00000436336 SULT1C3Q6IMI6 304 aa22.44■■□□□ 1.18
CPSF4-204ENST00000436336 NRROSQ86YC3 692 aa22.44■■□□□ 1.18
CPSF4-204ENST00000436336 MAGEC3Q8TD91 643 aa22.44■■□□□ 1.18
CPSF4-204ENST00000436336 TMEM237Q96Q45 408 aa22.44■■□□□ 1.18
CPSF4-204ENST00000436336 PCOLCE2Q9UKZ9 415 aa22.44■■□□□ 1.18
CPSF4-204ENST00000436336 ASF1AQ9Y294 204 aa22.44■■□□□ 1.18
CPSF4-204ENST00000436336 ARHGEF17Q96PE2 2063 aaPredicted RBP22.44■■□□□ 1.18
CPSF4-204ENST00000436336 PDZK1P1A8MUH7 402 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 TCP11X1B4DZS4 312 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 RPN2P04844 631 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 BDKRB1P46663 353 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 NAGLUP54802 743 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 HERVK_113P63132 956 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 BST1Q10588 318 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 STX3Q13277 289 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 ABRAXAS1Q6UWZ7 409 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 TCAIMQ8N3R3 496 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 ERVK-6Q9BXR3 956 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 PRDM8Q9NQV8 689 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 TMEM74BQ9NUR3 256 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 PI4KAP42356 2102 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 SRRM3A6NNA2 597 aaPredicted RBP22.43■■□□□ 1.18
CPSF4-204ENST00000436336 GALR2O43603 387 aaPredicted RBP22.43■■□□□ 1.18
CPSF4-204ENST00000436336 HALP42357 657 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 DPP6P42658 865 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 SIM2Q14190 667 aaPredicted RBP22.43■■□□□ 1.18
CPSF4-204ENST00000436336 ZNF678Q5SXM1 525 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 PEAR1Q5VY43 1037 aaPredicted RBP22.43■■□□□ 1.18
CPSF4-204ENST00000436336 SLC30A9Q6PML9 568 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 RHBDF1Q96CC6 855 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 C12orf66Q96MD2 445 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 INSM2Q96T92 566 aaPredicted RBP22.43■■□□□ 1.18
CPSF4-204ENST00000436336 C1QTNF3Q9BXJ4 246 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 TBC1D29Q9UFV1 150 aa22.43■■□□□ 1.18
CPSF4-204ENST00000436336 PTBP2Q9UKA9 531 aaKnown RBP22.43■■□□□ 1.18
CPSF4-204ENST00000436336 A0A0C4DFX4 3053 aa22.42■■□□□ 1.18
CPSF4-204ENST00000436336 TMEM114B3SHH9 223 aa22.42■■□□□ 1.18
CPSF4-204ENST00000436336 HNMTP50135 292 aa22.42■■□□□ 1.18
CPSF4-204ENST00000436336 CLCA4Q14CN2 919 aa22.42■■□□□ 1.18
CPSF4-204ENST00000436336 CES4AQ5XG92 561 aa22.42■■□□□ 1.18
CPSF4-204ENST00000436336 TTC23LQ6PF05 361 aa22.42■■□□□ 1.18
CPSF4-204ENST00000436336 SYT12Q8IV01 421 aa22.42■■□□□ 1.18
CPSF4-204ENST00000436336 OR5K2Q8NHB8 316 aa22.42■■□□□ 1.18
CPSF4-204ENST00000436336 CCDC138Q96M89 665 aa22.42■■□□□ 1.18
CPSF4-204ENST00000436336 ZNF317Q96PQ6 595 aaPredicted RBP22.42■■□□□ 1.18
CPSF4-204ENST00000436336 LRRC61Q9BV99 259 aa22.42■■□□□ 1.18
CPSF4-204ENST00000436336 TNPO3Q9Y5L0 923 aaKnown RBP22.42■■□□□ 1.18
CPSF4-204ENST00000436336 NPHS1O60500 1241 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 SIX3O95343 332 aaPredicted RBP22.41■■□□□ 1.18
CPSF4-204ENST00000436336 SERPINB5P36952 375 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 NAA20P61599 178 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 TCEA2Q15560 299 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 CFAP157Q5JU67 520 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 MBOAT1Q6ZNC8 495 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 DCUN1D3Q8IWE4 304 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 TBC1D21Q8IYX1 336 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 CCNYL1Q8N7R7 359 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 RAD51AP1Q96B01 352 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 CHMP6Q96FZ7 201 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 COL25A1Q9BXS0 654 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms