RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 PLOD2O00469 737 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 EFCAB14O75071 495 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 H6PDO95479 791 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 CCR2P41597 374 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 GNPDA1P46926 289 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 HSPA14Q0VDF9 509 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 FAM174BQ3ZCQ3 159 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 TMTC4Q5T4D3 741 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 CWF19L1Q69YN2 538 aaKnown RBP12.1□□□□□ -0.47
UBA3-203ENST00000415609 GLYATQ6IB77 296 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 LILRA6Q6PI73 481 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 UBE2R2Q712K3 238 aaPredicted RBP12.1□□□□□ -0.47
UBA3-203ENST00000415609 OTOP2Q7RTS6 562 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 TBC1D21Q8IYX1 336 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 RGL4Q8IZJ4 473 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 MFSD2AQ8NA29 543 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 FAM47BQ8NA70 645 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 CHST14Q8NCH0 376 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 TFAP2CQ92754 450 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 NMD3Q96D46 503 aaKnown RBP12.1□□□□□ -0.47
UBA3-203ENST00000415609 DGCR14Q96DF8 476 aaKnown RBP12.1□□□□□ -0.47
UBA3-203ENST00000415609 MTFMTQ96DP5 389 aaKnown RBP12.1□□□□□ -0.47
UBA3-203ENST00000415609 RMND5BQ96G75 393 aaPredicted RBP12.1□□□□□ -0.47
UBA3-203ENST00000415609 ZNF641Q96N77 438 aaPredicted RBP12.1□□□□□ -0.47
UBA3-203ENST00000415609 HAUS8Q9BT25 410 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 BBS2Q9BXC9 721 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 EMILIN2Q9BXX0 1053 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 CPEB1Q9BZB8 566 aaKnown RBP12.1□□□□□ -0.47
UBA3-203ENST00000415609 CEP44Q9C0F1 390 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 SMOXQ9NWM0 555 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 ZNHIT2Q9UHR6 403 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 PDE10AQ9Y233 779 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 PPIL1Q9Y3C6 166 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 PCDHB3Q9Y5E6 796 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 CXorf51AA0A1B0GTR3 108 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 RASAL1O95294 804 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 CLDN9O95484 217 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 PABPC1P11940 636 aaKnown RBP12.1□□□□□ -0.47
UBA3-203ENST00000415609 NR1H2P55055 460 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 BOP1Q14137 746 aaKnown RBP12.1□□□□□ -0.47
UBA3-203ENST00000415609 KIAA0040Q15053 153 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 CPSF6Q16630 551 aaKnown RBP eCLIP12.1□□□□□ -0.47
UBA3-203ENST00000415609 SMU1Q2TAY7 513 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 ZDHHC20Q5W0Z9 365 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 TRIM46Q7Z4K8 759 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 KLHL23Q8NBE8 558 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 OSCP1Q8WVF1 389 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 VPS50Q96JG6 964 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 RNF145Q96MT1 663 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 ADI1Q9BV57 179 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 SLC29A3Q9BZD2 475 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 SLC32A1Q9H598 525 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 VCX3AQ9NNX9 186 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 KLHL42Q9P2K6 505 aa12.1□□□□□ -0.47
UBA3-203ENST00000415609 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.1□□□□□ -0.47
UBA3-203ENST00000415609 ZBBXA8MT70 800 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 H3BNH8 94 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 EI24O14681 340 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 DFNA5O60443 496 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 GMNNO75496 209 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 TIMP1P01033 207 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 LDLRP01130 860 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 KRT6AP02538 564 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 KRT6BP04259 564 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 HIST1H2AGP0C0S8 130 aaPredicted RBP12.09□□□□□ -0.47
UBA3-203ENST00000415609 PFKLP17858 780 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 HIST1H2ADP20671 130 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 AOAHP28039 575 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 RECQLP46063 649 aaPredicted RBP12.09□□□□□ -0.47
UBA3-203ENST00000415609 KRT6CP48668 564 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 SPINT3P49223 89 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 ADRM1Q16186 407 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 FXNQ16595 210 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 MAPKAPK3Q16644 382 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.09□□□□□ -0.47
UBA3-203ENST00000415609 GDPD4Q6W3E5 623 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 DNAJC14Q6Y2X3 702 aaPredicted RBP12.09□□□□□ -0.47
UBA3-203ENST00000415609 RNF165Q6ZSG1 346 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 SPRED1Q7Z699 444 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 DTWD1Q8N5C7 304 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 KRTCAP2Q8N6L1 136 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 TRIML2Q8N7C3 387 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 PAPD5Q8NDF8 572 aaKnown RBP12.09□□□□□ -0.47
UBA3-203ENST00000415609 OR8J3Q8NGG0 315 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 CLHC1Q8NHS4 586 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 USP7Q93009 1102 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 TCEAL4Q96EI5 215 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 HIST1H2AHQ96KK5 128 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 HIST1H2AJQ99878 128 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 H2AFJQ9BTM1 129 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 BEGAINQ9BUH8 593 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 CHID1Q9BWS9 393 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 C8orf4Q9NR00 106 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 C1orf109Q9NX04 203 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 PKD2L2Q9NZM6 624 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 VAPAQ9P0L0 249 aa12.09□□□□□ -0.47
UBA3-203ENST00000415609 IGLV3-16A0A075B6K0 115 aa12.08□□□□□ -0.48
UBA3-203ENST00000415609 DLGAP1O14490 977 aa12.08□□□□□ -0.48
UBA3-203ENST00000415609 VILLO15195 856 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms