RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 UBXN1Q04323 297 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 CRYZQ08257 329 aaKnown RBP4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 MZT1Q08AG7 82 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 RABEP1Q15276 862 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 UGCGQ16739 394 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZNF674Q2M3X9 581 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 SMU1Q2TAY7 513 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 TMEM35AQ53FP2 167 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 FAM91A1Q658Y4 838 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 TRNP1Q6NT89 227 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 PLEKHM3Q6ZWE6 761 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 PHLDB2Q86SQ0 1253 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 TLK2Q86UE8 772 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 MAP7D3Q8IWC1 876 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 KLHL7Q8IXQ5 586 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 SRRM1Q8IYB3 904 aaKnown RBP4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 RNF113BQ8IZP6 322 aaKnown RBP4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 CHCHD4Q8N4Q1 142 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZNF611Q8N823 705 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 RDM1Q8NG50 284 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 CTCFLQ8NI51 663 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 CORO2AQ92828 525 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 PIGTQ969N2 578 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 MOB3AQ96BX8 217 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 LMF2Q9BU23 707 aaKnown RBP4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 FUT8Q9BYC5 575 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 SPRY4Q9C004 299 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 DBNDD1Q9H9R9 158 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 ABCB8Q9NUT2 735 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 ADPRHL2Q9NX46 363 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 CHCHD3Q9NX63 227 aaKnown RBP4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 ARMCX3Q9UH62 379 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 PADI3Q9ULW8 664 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 YIPF1Q9Y548 306 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 EVC2Q86UK5 1308 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZNF521Q96K83 1311 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 SYNMO15061 1565 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 SETBP1Q9Y6X0 1596 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 IQGAP1P46940 1657 aa4.6□□□□□ -1.67
HMGB3P18-201ENST00000406327 A0A1W2PP11 408 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 OR2M5A3KFT3 312 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 OOEPA6NGQ2 149 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 ADGRB1O14514 1584 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 MEIS2O14770 477 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 TOMM70O94826 608 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 DDNO94850 711 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 CEP152O94986 1710 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 MOCS3O95396 460 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 LDLRP01130 860 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 PSG1P11464 419 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 MYL6BP14649 208 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 ADRA2CP18825 462 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 POLR2CP19387 275 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 USP8P40818 1118 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 HNF4AP41235 474 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 PRKCIP41743 596 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 RFX5P48382 616 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 MEP1BQ16820 701 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 C2orf76Q3KRA6 126 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 KLHL26Q53HC5 615 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 ZRANB3Q5FWF4 1079 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 PRR27Q6MZM9 219 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 DPY19L2P1Q6NXN4 242 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 LINC00696Q6ZRV3 163 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 OTOAQ7RTW8 1153 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 PIWIL3Q7Z3Z3 882 aaKnown RBP4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 ABCA6Q8N139 1617 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 SPC24Q8NBT2 197 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 ACVR1CQ8NER5 493 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 OR2AJ1Q8NGZ0 328 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 EXOC6Q8TAG9 804 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 MUS81Q96NY9 551 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 OLFM1Q99784 485 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 DPAGT1Q9H3H5 408 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 FN3KQ9H479 309 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 IL1RAPL2Q9NP60 686 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 NOX4Q9NPH5 578 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 C1RLQ9NZP8 487 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 KIAA1210Q9ULL0 1709 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 DIP2CQ9Y2E4 1556 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 PTGDR2Q9Y5Y4 395 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 NFS1Q9Y697 457 aa4.59□□□□□ -1.67
HMGB3P18-201ENST00000406327 POLR3AO14802 1390 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 PLEKHH1Q9ULM0 1364 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 CGNL1Q0VF96 1302 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 IGSF1Q8N6C5 1336 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 A0A1B0GVT2 93 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 A0A1W2PPM1 405 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 MED19A0JLT2 244 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 INAFM1C9JVW0 142 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 DNM1LO00429 736 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 PTGESO14684 152 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 PPEF2O14830 753 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 GPR137BO60478 399 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 FMO6PO60774 539 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 GLUD1P00367 558 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZFYP08048 801 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 HOXC6P09630 235 aa4.58□□□□□ -1.68
HMGB3P18-201ENST00000406327 GNL1P36915 607 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms