RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 ANKRD7Q92527 254 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 PDLIM5Q96HC4 596 aaKnown RBP17.2■□□□□ 0.34
CTNS-203ENST00000399306 TWSG1Q9GZX9 223 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 GALPQ9UBC7 116 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 CFAP20Q9Y6A4 193 aaKnown RBP17.2■□□□□ 0.34
CTNS-203ENST00000399306 MN1Q10571 1320 aaPredicted RBP17.2■□□□□ 0.34
CTNS-203ENST00000399306 FAM95CA0A1B0GW59 222 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 JUPP14923 745 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 SHMT2P34897 504 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 CAPZBP47756 277 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 PMS2P54278 862 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 CDKN2DP55273 166 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 ISXQ2M1V0 245 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 ACSBG2Q5FVE4 666 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 CCDC91Q7Z6B0 441 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 SLITRK4Q8IW52 837 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 PPM1NQ8N819 430 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 GPATCH11Q8N954 259 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 SIDT2Q8NBJ9 832 aaKnown RBP17.19■□□□□ 0.34
CTNS-203ENST00000399306 TSPAN17Q96FV3 270 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 LIN37Q96GY3 246 aaPredicted RBP17.19■□□□□ 0.34
CTNS-203ENST00000399306 NDNQ99608 321 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 SLC30A3Q99726 388 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 RAB11FIP5Q9BXF6 653 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 TBC1D10AQ9BXI6 508 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 SYTL2Q9HCH5 934 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 FETUBQ9UGM5 382 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 NCOR2Q9Y618 2525 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 SPEGQ15772 3267 aa17.19■□□□□ 0.34
CTNS-203ENST00000399306 HGSO14964 777 aaPredicted RBP17.18■□□□□ 0.34
CTNS-203ENST00000399306 PSIP1O75475 530 aaKnown RBP17.18■□□□□ 0.34
CTNS-203ENST00000399306 ACSL3O95573 720 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 C9P02748 559 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 AMD1P17707 334 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 IL2P60568 153 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 FOXC1Q12948 553 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 EIF3IQ13347 325 aaKnown RBP17.18■□□□□ 0.34
CTNS-203ENST00000399306 PDAP1Q13442 181 aaKnown RBP17.18■□□□□ 0.34
CTNS-203ENST00000399306 PLCL1Q15111 1095 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 MAP9Q49MG5 647 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 DUS1LQ6P1R4 473 aaKnown RBP17.18■□□□□ 0.34
CTNS-203ENST00000399306 CYHR1Q6ZMK1 362 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 OOSP2Q86WS3 158 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 NKAPQ8N5F7 415 aaKnown RBP17.18■□□□□ 0.34
CTNS-203ENST00000399306 OR5AR1Q8NGP9 310 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 SLC44A1Q8WWI5 657 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 LCN9Q8WX39 176 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 ASB11Q8WXH4 323 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 RAD51AP1Q96B01 352 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 ZDHHC12Q96GR4 267 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 ELMO2Q96JJ3 720 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 CD180Q99467 661 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 OR6C2Q9NZP2 312 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 OGFRQ9NZT2 677 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 SEMA5BQ9P283 1151 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 MSRB2Q9Y3D2 182 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 ENTPD2Q9Y5L3 495 aa17.18■□□□□ 0.34
CTNS-203ENST00000399306 PRAMEF33A0A0G2JMD5 474 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 GFYI3L273 518 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 SLC16A5O15375 505 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 RIPK2O43353 540 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 HYAL3O43820 417 aaPredicted RBP17.17■□□□□ 0.34
CTNS-203ENST00000399306 C1orf105O95561 183 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 CATP04040 527 aaKnown RBP17.17■□□□□ 0.34
CTNS-203ENST00000399306 F7P08709 466 aaPredicted RBP17.17■□□□□ 0.34
CTNS-203ENST00000399306 ANKRD34CP0C6C1 535 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 FAM153BP0C7A2 387 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 MYBL2P10244 700 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 CNTFP26441 200 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 HSD17B2P37059 387 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 SLC12A2P55011 1212 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 INHBCP55103 352 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 CFHR1Q03591 330 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 ABRQ12979 859 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 SP140Q13342 867 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 AMZ1Q400G9 498 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 FAM153CQ494X1 144 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 PAQR3Q6TCH7 311 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 ZNF761Q86XN6 746 aaPredicted RBP17.17■□□□□ 0.34
CTNS-203ENST00000399306 OR52E1Q8NGJ3 308 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 OLFM1Q99784 485 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 NUDT22Q9BRQ3 303 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 STRADBQ9C0K7 418 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 SPATA7Q9P0W8 599 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 ZNF180Q9UJW8 692 aa17.17■□□□□ 0.34
CTNS-203ENST00000399306 OR5K3A6NET4 321 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 CSO75390 466 aaKnown RBP17.16■□□□□ 0.34
CTNS-203ENST00000399306 C8GP07360 202 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 THRAP10827 490 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 ZNF37AP17032 561 aaPredicted RBP17.16■□□□□ 0.34
CTNS-203ENST00000399306 CSF2RBP32927 897 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 SLC26A3P40879 764 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 MLLT3P42568 568 aaPredicted RBP17.16■□□□□ 0.34
CTNS-203ENST00000399306 SERPINB9P50453 376 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 RAB28P51157 221 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 PDX1P52945 283 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 TAS2R39P59534 338 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 TARDBPQ13148 414 aaKnown RBP eCLIP17.16■□□□□ 0.34
CTNS-203ENST00000399306 ARHGAP19Q14CB8 494 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 ZKSCAN8Q15776 578 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms