RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 AGAP4Q96P64 663 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 TMEM121Q9BTD3 319 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 PITPNM3Q9BZ71 974 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 WWP1Q9H0M0 922 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 SLC25A51Q9H1U9 297 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 TRABDQ9H4I3 376 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 CBX8Q9HC52 389 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 BPIFA1Q9NP55 256 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 IL26Q9NPH9 171 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 SEC14L3Q9UDX4 400 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 ANAPC7Q9UJX3 599 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 ACSL5Q9ULC5 683 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 COLEC10Q9Y6Z7 277 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 MGAT4DA6NG13 374 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 OR2AG2A6NM03 316 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 MYO1FO00160 1098 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 ALOX12BO75342 701 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 PYGMP11217 842 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 ST6GAL1P15907 406 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 HLA-DPA1P20036 260 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 CDK11BP21127 795 aaKnown RBP9.1□□□□□ -0.95
NEDD9-203ENST00000397378 PRDX3P30048 256 aaKnown RBP9.1□□□□□ -0.95
NEDD9-203ENST00000397378 ADSLP30566 484 aaPredicted RBP9.1□□□□□ -0.95
NEDD9-203ENST00000397378 MYL5Q02045 173 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 FOLH1Q04609 750 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 ITGA9Q13797 1035 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 PCSK7Q16549 785 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 ATP13A4Q4VNC1 1196 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 KCTD6Q8NC69 237 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 CATSPER1Q8NEC5 780 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 ACVR1CQ8NER5 493 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 SPDYE1Q8NFV5 336 aaPredicted RBP9.1□□□□□ -0.95
NEDD9-203ENST00000397378 OR4E2Q8NGC2 313 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 OR1N1Q8NGS0 311 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 OR2Y1Q8NGV0 311 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 OR2L2Q8NH16 312 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 NACC2Q96BF6 587 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 PTERQ96BW5 349 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 ZNF830Q96NB3 372 aaPredicted RBP9.1□□□□□ -0.95
NEDD9-203ENST00000397378 HSD3B7Q9H2F3 369 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 SMOXQ9NWM0 555 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 IL17CQ9P0M4 197 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 TNFRSF10DQ9UBN6 386 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 GPN3Q9UHW5 284 aaPredicted RBP9.1□□□□□ -0.95
NEDD9-203ENST00000397378 SPO11Q9Y5K1 396 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 HEBP2Q9Y5Z4 205 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 AP1M2Q9Y6Q5 423 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 CSPG4Q6UVK1 2322 aa9.1□□□□□ -0.95
NEDD9-203ENST00000397378 H3BMH7 237 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 AGPSO00116 658 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 UGT1A9O60656 530 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 SLC19A2O60779 497 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 MT-CYBP00156 380 aaPredicted RBP9.09□□□□□ -0.95
NEDD9-203ENST00000397378 CYP1A2P05177 515 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 SLC35G4P0C7Q5 338 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 UGT1A6P19224 532 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 UGT1A1P22309 533 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 UGT1A4P22310 534 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 PBLDP30039 288 aaPredicted RBP9.09□□□□□ -0.95
NEDD9-203ENST00000397378 SPAM1P38567 509 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 SSR1P43307 286 aaKnown RBP9.09□□□□□ -0.95
NEDD9-203ENST00000397378 LMAN1P49257 510 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 MEOX1P50221 254 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 C3AR1Q16581 482 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 LONRF2Q1L5Z9 754 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 FNBP1LQ5T0N5 605 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 GPRC6AQ5T6X5 926 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 PRAMEF13Q5VWM6 474 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 RHBDD2Q6NTF9 364 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 CLEC9AQ6UXN8 241 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 LINC00696Q6ZRV3 163 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 RBM43Q6ZSC3 357 aaKnown RBP9.09□□□□□ -0.95
NEDD9-203ENST00000397378 PPP1R32Q7Z5V6 425 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 GPR135Q8IZ08 494 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 DNAJB8Q8NHS0 232 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 PROKR1Q8TCW9 393 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 NINJ1Q92982 152 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 LINC00615Q96LM1 132 aaPredicted RBP9.09□□□□□ -0.95
NEDD9-203ENST00000397378 RMDN2Q96LZ7 410 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 RNF157Q96PX1 679 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 TAAR6Q96RI8 345 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 ZNF559Q9BR84 538 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 NDC1Q9BTX1 674 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 AP1M1Q9BXS5 423 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 CHRNA10Q9GZZ6 450 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 THAP2Q9H0W7 228 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 SRMSQ9H3Y6 488 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 UGT1A7Q9HAW7 530 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 UGT1A10Q9HAW8 530 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 UGT1A8Q9HAW9 530 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 GPAMQ9HCL2 828 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 TINAGQ9UJW2 476 aa9.09□□□□□ -0.95
NEDD9-203ENST00000397378 GLYATL1P3A0A0U1RQE8 302 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 LOC285095A0A1B0GVY8 99 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 GSAPA4D1B5 854 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 ZNF487B1APH4 448 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 BTN3A1O00481 513 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 GAPDHSO14556 408 aaPredicted RBP9.08□□□□□ -0.96
NEDD9-203ENST00000397378 GPR39O43194 453 aa9.08□□□□□ -0.96
NEDD9-203ENST00000397378 EPOP01588 193 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 406.7 ms