RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 ZNF527Q8NB42 609 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 OR4K17Q8NGC6 315 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 PWWP2AQ96N64 755 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 TBCBQ99426 244 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 PFDN5Q99471 154 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 MAGEL2Q9UJ55 1249 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 USP6P35125 1406 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 GLYATL1P3A0A0U1RQE8 302 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 NPIPA5E9PKD4 350 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 M0R2N6 131 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 NKRFO15226 690 aaKnown RBP eCLIP12.15□□□□□ -0.46
SMU1-201ENST00000397149 GLP1RP43220 463 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 GNPDA1P46926 289 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 LEPRP48357 1165 aaKnown RBP12.15□□□□□ -0.46
SMU1-201ENST00000397149 MFSD13AQ14CX5 517 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 NOMO2Q5JPE7 1267 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 PRPF38BQ5VTL8 546 aaKnown RBP12.15□□□□□ -0.46
SMU1-201ENST00000397149 GALNT6Q8NCL4 622 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 NXF3Q9H4D5 531 aaKnown RBP12.15□□□□□ -0.46
SMU1-201ENST00000397149 NPIPA1Q9UND3 350 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 CLEC6AQ6EIG7 209 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 SYCE2Q6PIF2 218 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 OR10Q1Q8NGQ4 319 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 DNAJC18Q9H819 358 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 FANCFQ9NPI8 374 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 B3GAT2Q9NPZ5 323 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 ARHGEF4Q9NR80 690 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 SNX15Q9NRS6 342 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 KIAA1522Q9P206 1035 aaPredicted RBP12.15□□□□□ -0.46
SMU1-201ENST00000397149 DEC1Q9P2X7 70 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 MAN2B2Q9Y2E5 1009 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.15□□□□□ -0.46
SMU1-201ENST00000397149 GLUD1P00367 558 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 MPSTP25325 297 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 MAPK8P45983 427 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 RGS6P49758 472 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 TXNRD3Q86VQ6 643 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
SMU1-201ENST00000397149 RBM4BQ9BQ04 359 aaKnown RBP12.15□□□□□ -0.46
SMU1-201ENST00000397149 RBM4Q9BWF3 364 aaKnown RBP12.15□□□□□ -0.46
SMU1-201ENST00000397149 LACRTQ9GZZ8 138 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 CLUHO75153 1309 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 TLR5O60602 858 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 GADD45GO95257 159 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 MYCLP1P12525 358 aaPredicted RBP12.15□□□□□ -0.46
SMU1-201ENST00000397149 MLLT3P42568 568 aaPredicted RBP12.15□□□□□ -0.46
SMU1-201ENST00000397149 BST1Q10588 318 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 PGM2L1Q6PCE3 622 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 OR8K3Q8NH51 312 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 CRAMP1Q96RY5 1269 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 RAP2CQ9Y3L5 183 aa12.15□□□□□ -0.46
SMU1-201ENST00000397149 A0A1W2PPL8 197 aa12.15□□□□□ -0.47
SMU1-201ENST00000397149 C9J4A7 227 aa12.15□□□□□ -0.47
SMU1-201ENST00000397149 DDNO94850 711 aaPredicted RBP12.15□□□□□ -0.47
SMU1-201ENST00000397149 HOXB8P17481 243 aaPredicted RBP12.15□□□□□ -0.47
SMU1-201ENST00000397149 FMO3P31513 532 aa12.15□□□□□ -0.47
SMU1-201ENST00000397149 PHC1P78364 1004 aa12.15□□□□□ -0.47
SMU1-201ENST00000397149 NFATC2Q13469 925 aa12.15□□□□□ -0.47
SMU1-201ENST00000397149 SLC2A7Q6PXP3 512 aa12.15□□□□□ -0.47
SMU1-201ENST00000397149 SPATA22Q8NHS9 363 aa12.15□□□□□ -0.47
SMU1-201ENST00000397149 EHD4Q9H223 541 aa12.15□□□□□ -0.47
SMU1-201ENST00000397149 DPPA5A6NC42 116 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 J3QLW9 94 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 SPARCP09486 303 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 ZNF19P17023 458 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 TPTEP56180 551 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 ST3GAL1Q11201 340 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 VITQ6UXI7 678 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 OR6N1Q8NGY5 312 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 MND1Q9BWT6 205 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 MKKSQ9NPJ1 570 aaPredicted RBP12.14□□□□□ -0.47
SMU1-201ENST00000397149 MAST1Q9Y2H9 1570 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 APOC4-APOC2K7ER74 178 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 APOC2P02655 101 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 RPLP2P05387 115 aaKnown RBP12.14□□□□□ -0.47
SMU1-201ENST00000397149 SLC26A2P50443 739 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 COL9A2Q14055 689 aaPredicted RBP12.14□□□□□ -0.47
SMU1-201ENST00000397149 GPAT4Q86UL3 456 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 CUZD1Q86UP6 607 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 ZCCHC9Q8N567 271 aaKnown RBP12.14□□□□□ -0.47
SMU1-201ENST00000397149 C12orf43Q96C57 262 aaKnown RBP12.14□□□□□ -0.47
SMU1-201ENST00000397149 KAT8Q9H7Z6 458 aaKnown RBP12.14□□□□□ -0.47
SMU1-201ENST00000397149 ELOVL7A1L3X0 281 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 MSI1O43347 362 aaKnown RBP12.14□□□□□ -0.47
SMU1-201ENST00000397149 TSHRP16473 764 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 OR1D2P34982 312 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 OR2B6P58173 313 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 GNG2P59768 71 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 C1QTNF8P60827 252 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 SP3Q02447 781 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 MED27Q6P2C8 311 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 TRAPPC6BQ86SZ2 158 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 TMEM151BQ8IW70 566 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 OR4K2Q8NGD2 314 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 SNRNP25Q9BV90 132 aaKnown RBP12.14□□□□□ -0.47
SMU1-201ENST00000397149 ADAM28Q9UKQ2 775 aa12.14□□□□□ -0.47
SMU1-201ENST00000397149 SPIN1Q9Y657 262 aaPredicted RBP12.14□□□□□ -0.47
SMU1-201ENST00000397149 IGSF1Q8N6C5 1336 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms