RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CFAP99D6REC4 459 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 PEX12O00623 359 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 ALPPP05187 535 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 ATP1B2P14415 290 aaPredicted RBP20.44■□□□□ 0.86
TRAF4-203ENST00000394925 ELOAQ14241 798 aaKnown RBP20.44■□□□□ 0.86
TRAF4-203ENST00000394925 TFDP3Q5H9I0 405 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 DCAF10Q5QP82 559 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 SARM1Q6SZW1 724 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 AMIGO1Q86WK6 493 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 ADGRF3Q8IZF5 1079 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 NXPE1Q8N323 547 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 OR13C4Q8NGS5 318 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 ULK4Q96C45 1275 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 COPS8Q99627 209 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 C17orf62Q9BQA9 187 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 GORASP1Q9BQQ3 440 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 HGH1Q9BTY7 390 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 OR52A5Q9H2C5 316 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 ZNF552Q9H707 407 aaPredicted RBP20.44■□□□□ 0.86
TRAF4-203ENST00000394925 C10orf88Q9H8K7 445 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 FAM60AQ9NP50 221 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 COPG1Q9Y678 874 aaKnown RBP20.44■□□□□ 0.86
TRAF4-203ENST00000394925 POLEQ07864 2286 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 ANKRD12Q6UB98 2062 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 C17orf113A0A1B0GUU1 675 aa20.43■□□□□ 0.86
TRAF4-203ENST00000394925 HACD1B0YJ81 288 aa20.43■□□□□ 0.86
TRAF4-203ENST00000394925 MASP2O00187 686 aa20.43■□□□□ 0.86
TRAF4-203ENST00000394925 ANXA9O76027 345 aa20.43■□□□□ 0.86
TRAF4-203ENST00000394925 PDHA2P29803 388 aa20.43■□□□□ 0.86
TRAF4-203ENST00000394925 FOLR3P41439 243 aa20.43■□□□□ 0.86
TRAF4-203ENST00000394925 RANBP10Q6VN20 620 aa20.43■□□□□ 0.86
TRAF4-203ENST00000394925 HOOK3Q86VS8 718 aa20.43■□□□□ 0.86
TRAF4-203ENST00000394925 INPP5DQ92835 1189 aa20.43■□□□□ 0.86
TRAF4-203ENST00000394925 CCDC42Q96M95 316 aa20.43■□□□□ 0.86
TRAF4-203ENST00000394925 SPRTNQ9H040 489 aaPredicted RBP20.43■□□□□ 0.86
TRAF4-203ENST00000394925 GBA3Q9H227 469 aa20.43■□□□□ 0.86
TRAF4-203ENST00000394925 MVB12BQ9H7P6 319 aa20.43■□□□□ 0.86
TRAF4-203ENST00000394925 hCG_1818297A0A087WSY0 165 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 PSTPIP1O43586 416 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 OR2B3O76000 313 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 ITGALP20701 1170 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 RBL1P28749 1068 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 GLRBP48167 497 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 CD151P48509 253 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 FOXL2P58012 376 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 DEFB110Q30KQ9 67 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 SPESP1Q6UW49 350 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 IGFL3Q6UXB1 125 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 TRIM73Q86UV7 250 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 CCDC50Q8IVM0 306 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 ZADH2Q8N4Q0 377 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 C19orf47Q8N9M1 422 aaKnown RBP20.42■□□□□ 0.86
TRAF4-203ENST00000394925 TTC13Q8NBP0 860 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 HEXDCQ8WVB3 486 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 NHEJ1Q9H9Q4 299 aaPredicted RBP20.42■□□□□ 0.86
TRAF4-203ENST00000394925 P4HTMQ9NXG6 502 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 IFT80Q9P2H3 777 aaPredicted RBP20.42■□□□□ 0.86
TRAF4-203ENST00000394925 NDOR1Q9UHB4 597 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 CDYLQ9Y232 598 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 AP1M2Q9Y6Q5 423 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 CNTRLQ7Z7A1 2325 aa20.42■□□□□ 0.86
TRAF4-203ENST00000394925 H7C0C1 242 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 CCL22O00626 93 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 HCRTR1O43613 425 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 KLHL41O60662 606 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 CRTAMO95727 393 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 IGHEP01854 428 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 TPM3P06753 285 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 ADRA1AP35348 466 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 ATP5OP48047 213 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 DCDP81605 110 aaKnown RBP20.41■□□□□ 0.86
TRAF4-203ENST00000394925 SLC9A5Q14940 896 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 ZNF658BQ4V348 819 aaPredicted RBP20.41■□□□□ 0.86
TRAF4-203ENST00000394925 CRB2Q5IJ48 1285 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 RHBDD2Q6NTF9 364 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 ZNF449Q6P9G9 518 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 SNX20Q7Z614 316 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 TM9SF4Q92544 642 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 TFGQ92734 400 aaPredicted RBP20.41■□□□□ 0.86
TRAF4-203ENST00000394925 GBP5Q96PP8 586 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 GOLPH3Q9H4A6 298 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 ZBTB20Q9HC78 741 aaPredicted RBP20.41■□□□□ 0.86
TRAF4-203ENST00000394925 DHCR7Q9UBM7 475 aaKnown RBP20.41■□□□□ 0.86
TRAF4-203ENST00000394925 NTNG1Q9Y2I2 539 aa20.41■□□□□ 0.86
TRAF4-203ENST00000394925 H3BMH7 237 aa20.4■□□□□ 0.86
TRAF4-203ENST00000394925 IPO13O94829 963 aaKnown RBP20.4■□□□□ 0.86
TRAF4-203ENST00000394925 ZRANB2O95218 330 aaKnown RBP eCLIP20.4■□□□□ 0.86
TRAF4-203ENST00000394925 CDKN1CP49918 316 aaPredicted RBP20.4■□□□□ 0.86
TRAF4-203ENST00000394925 ZNF140P52738 457 aaPredicted RBP20.4■□□□□ 0.86
TRAF4-203ENST00000394925 BOP1Q14137 746 aaKnown RBP20.4■□□□□ 0.86
TRAF4-203ENST00000394925 ZIC1Q15915 447 aa20.4■□□□□ 0.86
TRAF4-203ENST00000394925 ITPRIPL1Q6GPH6 555 aa20.4■□□□□ 0.86
TRAF4-203ENST00000394925 MICALCLQ6ZW33 695 aa20.4■□□□□ 0.86
TRAF4-203ENST00000394925 CUZD1Q86UP6 607 aa20.4■□□□□ 0.86
TRAF4-203ENST00000394925 TMEM151BQ8IW70 566 aa20.4■□□□□ 0.86
TRAF4-203ENST00000394925 OR2Y1Q8NGV0 311 aa20.4■□□□□ 0.86
TRAF4-203ENST00000394925 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.4■□□□□ 0.868e-6■■■□□ 18.3
TRAF4-203ENST00000394925 HEMGNQ9BXL5 484 aa20.4■□□□□ 0.86
TRAF4-203ENST00000394925 VPS37BQ9H9H4 285 aa20.4■□□□□ 0.86
TRAF4-203ENST00000394925 ZDHHC3Q9NYG2 299 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms