RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 EGLN2Q96KS0 407 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 SGK494Q96LW2 274 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 ZNF597Q96LX8 424 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CEP295NLQ96MC4 621 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 ZNF582Q96NG8 517 aaPredicted RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 PSMB7Q99436 277 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 GFI1Q99684 422 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 PYM1Q9BRP8 204 aaKnown RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CHCHD5Q9BSY4 110 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 C1QTNF1Q9BXJ1 281 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 SLC39A8Q9C0K1 460 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 TMX4Q9H1E5 349 aaPredicted RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 S1PR5Q9H228 398 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 ADNPQ9H2P0 1102 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 RANBP17Q9H2T7 1088 aaKnown RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 SLA2Q9H6Q3 261 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 MAGIXQ9H6Y5 334 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 MED20Q9H944 212 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 EPB41L5Q9HCM4 733 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 RANGRFQ9HD47 186 aaPredicted RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 PPANQ9NQ55 473 aaKnown RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 PLCB1Q9NQ66 1216 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 ITM2CQ9NQX7 267 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 PCDHB16Q9NRJ7 776 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 MAN2C1Q9NTJ4 1040 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 MTMR10Q9NXD2 777 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 NDE1Q9NXR1 346 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 OR6C2Q9NZP2 312 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 NPAP1Q9NZP6 1156 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 KCND2Q9NZV8 630 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 MPP6Q9NZW5 540 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 TSPYL4Q9UJ04 414 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 MKLN1Q9UL63 735 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 PPP2R2CQ9Y2T4 447 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 WBP11Q9Y2W2 641 aaKnown RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 SPIN1Q9Y657 262 aaPredicted RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 AHNAK2Q8IVF2 5795 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 FCGBPQ9Y6R7 5405 aaPredicted RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 HIVEP2P31629 2446 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 PRSS51A0A1B0GVH4 220 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 A0A1W2PN81 502 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 FAM168BA1KXE4 195 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 TRIM49BA6NDI0 452 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ANKRD61A6NGH8 418 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 TCP11X1B4DZS4 312 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 EPHB6O15197 1021 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 HDAC3O15379 428 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 TMCC2O75069 709 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 AVILO75366 819 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 FOXH1O75593 365 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 SLC25A12O75746 678 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 DDHD2O94830 711 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 SEC24AO95486 1093 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 PROS1P07225 676 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 HOXC4P09017 264 aaPredicted RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 HNRNPA1P09651 372 aaKnown RBP eCLIP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ZNF853P0CG23 659 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 SLC2A2P11168 524 aaPredicted RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 PDHA2P29803 388 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ABCD1P33897 745 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 CHRNA7P36544 502 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 MSH2P43246 934 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 RPL21P46778 160 aaKnown RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 CCR5P51681 352 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 LBX1P52954 281 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 GALCP54803 685 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 UCNP55089 124 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 XGP55808 180 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ARL4CP56559 192 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 B3GALT5-AS1P59052 145 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 TAS2R40P59535 323 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 RPS3AP61247 264 aaKnown RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 CSNK2BP67870 215 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 MRPS34P82930 218 aaKnown RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 UBE3AQ05086 875 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 RUNX3Q13761 415 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 MVPQ14764 893 aaKnown RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 GPR68Q15743 365 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 FAM189A2Q15884 450 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 PDCD2Q16342 344 aaPredicted RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 PHLDA2Q53GA4 152 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 SLC25A53Q5H9E4 307 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 MDH1BQ5I0G3 518 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 FBXO47Q5MNV8 452 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ATAD3CQ5T2N8 411 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 LCN1P1Q5VSP4 162 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ANO1Q5XXA6 986 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 NOTUMQ6P988 496 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 REG3GQ6UW15 175 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 LCLAT1Q6UWP7 414 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 TIFABQ6ZNK6 161 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 TPRG1Q6ZUI0 275 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 BBS12Q6ZW61 710 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 Q7L0L9 218 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ADGRD2Q7Z7M1 963 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ZFAND4Q86XD8 727 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 GALNT13Q8IUC8 556 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 TMEM139Q8IV31 216 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 CDK20Q8IZL9 346 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 TMTC2Q8N394 836 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms