RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 QPCTQ16769 361 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 SLC22A25Q6T423 547 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 KCTD9Q7L273 389 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 TCTE3Q8IZS6 198 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ANKRD52Q8NB46 1076 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 UCK2Q9BZX2 261 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 IRS2Q9Y4H2 1338 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 PPP1R3GB7ZBB8 358 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ZNF878C9JN71 531 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 APOC4-APOC2K7ER74 178 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 PRKYO43930 277 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 MFSD11O43934 449 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 CLN5O75503 358 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 APOC2P02655 101 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 GSTM2P28161 218 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 DGKGP49619 791 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 PLK1P53350 603 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 TAS2R31P59538 309 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ACTA2P62736 377 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ACTG2P63267 376 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ACTC1P68032 377 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ACTA1P68133 377 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 HEPACAMQ14CZ8 416 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 C16orf86Q6ZW13 317 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 C12orf40Q86WS4 652 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 CARM1Q86X55 608 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 CSGALNACT1Q8TDX6 532 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 PSKH2Q96QS6 385 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 SLC38A1Q9H2H9 487 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 OPA3Q9H6K4 179 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ENAMQ9NRM1 1142 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ASF1BQ9NVP2 202 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 STUB1Q9UNE7 303 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ADAM18Q9Y3Q7 739 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 PCDHA2Q9Y5H9 948 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 IGF1RP08069 1367 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 NPIPA5A0A0B4J1W7 369 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 STK25O00506 426 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 HNF1AP20823 631 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 POLR2HP52434 150 aaKnown RBP8.61□□□□□ -1.03
LIG3-202ENST00000378526 MANFP55145 182 aaKnown RBP8.61□□□□□ -1.03
LIG3-202ENST00000378526 ZNF33AQ06730 810 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 NIPAL4Q0D2K0 466 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 FSTL1Q12841 308 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 STK11Q15831 433 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 KHDC1Q4VXA5 237 aaKnown RBP8.61□□□□□ -1.03
LIG3-202ENST00000378526 EIPR1Q53HC9 387 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 MARC1Q5VT66 337 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 CNKSR3Q6P9H4 555 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 SLC36A4Q6YBV0 504 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 POGLUT1Q8NBL1 392 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 SEMA4BQ9NPR2 832 aaPredicted RBP8.61□□□□□ -1.03
LIG3-202ENST00000378526 CALML5Q9NZT1 146 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 CD300AQ9UGN4 299 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 MED31Q9Y3C7 131 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 CPED1A4D0V7 1026 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ATG12O94817 140 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 CYP1A2P05177 515 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 HLA-EP13747 358 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 RBMXP38159 391 aaKnown RBP8.61□□□□□ -1.03
LIG3-202ENST00000378526 LRP8Q14114 963 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 LBHQ53QV2 105 aaPredicted RBP8.61□□□□□ -1.03
LIG3-202ENST00000378526 C10orf120Q5SQS8 335 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 TMEM214Q6NUQ4 689 aaKnown RBP8.61□□□□□ -1.03
LIG3-202ENST00000378526 TAPT1Q6NXT6 567 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 GSG1LQ6UXU4 331 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 KIAA1143Q96AT1 154 aaPredicted RBP8.61□□□□□ -1.03
LIG3-202ENST00000378526 RTFDC1Q9BY42 306 aaPredicted RBP8.61□□□□□ -1.03
LIG3-202ENST00000378526 ZFP14Q9HCL3 533 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 RNF6Q9Y252 685 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 NPC1O15118 1278 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 SRPRAP08240 638 aaKnown RBP8.61□□□□□ -1.03
LIG3-202ENST00000378526 ANXA8P13928 327 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ACVR2AP27037 513 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 EPHA3P29320 983 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ATP5C1P36542 298 aaKnown RBP8.61□□□□□ -1.03
LIG3-202ENST00000378526 CDK8P49336 464 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 SIM2Q14190 667 aaPredicted RBP8.61□□□□□ -1.03
LIG3-202ENST00000378526 MAPK14Q16539 360 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ELP2Q6IA86 826 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 RPL13AP3Q6NVV1 102 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 RASGRP3Q8IV61 690 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 GDPD1Q8N9F7 314 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 FAM46DQ8NEK8 389 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 SMPDL3AQ92484 453 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 IP6K1Q92551 441 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 PIWIL1Q96J94 861 aaKnown RBP8.61□□□□□ -1.03
LIG3-202ENST00000378526 TGIF2Q9GZN2 237 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 ADAM19Q9H013 955 aa8.61□□□□□ -1.03
LIG3-202ENST00000378526 TTLL8A6PVC2 850 aa8.6□□□□□ -1.03
LIG3-202ENST00000378526 TNFRSF10AO00220 468 aa8.6□□□□□ -1.03
LIG3-202ENST00000378526 PRAMEF2O60811 474 aa8.6□□□□□ -1.03
LIG3-202ENST00000378526 ACADMP11310 421 aa8.6□□□□□ -1.03
LIG3-202ENST00000378526 HDCP19113 662 aa8.6□□□□□ -1.03
LIG3-202ENST00000378526 CCR10P46092 362 aa8.6□□□□□ -1.03
LIG3-202ENST00000378526 AIF1P55008 147 aa8.6□□□□□ -1.03
LIG3-202ENST00000378526 RPL38P63173 70 aaKnown RBP8.6□□□□□ -1.03
LIG3-202ENST00000378526 TLE1Q04724 770 aa8.6□□□□□ -1.03
LIG3-202ENST00000378526 FAM69CQ0P6D2 419 aa8.6□□□□□ -1.03
LIG3-202ENST00000378526 MCOLN2Q8IZK6 566 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms