RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 DNAJB13P59910 316 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 TIGD6Q17RP2 521 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 FIBCD1Q8N539 461 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 FCRL3Q96P31 734 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-203ENST00000375274 RRAGCQ9HB90 399 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 EXD2Q9NVH0 621 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 LCHNA4D1U4 455 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 CLIC1O00299 241 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 ASGR1P07306 291 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF252P-AS1Q0IIN9 211 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 RFTN1Q14699 578 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-203ENST00000375274 PPP1R3AQ16821 1122 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 C5orf22Q49AR2 442 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 ATXN7L2Q5T6C5 722 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-203ENST00000375274 PIK3R6Q5UE93 754 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 OR2T5Q6IEZ7 315 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF730Q6ZMV8 503 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 CTU1Q7Z7A3 348 aaKnown RBP11.34□□□□□ -0.59
PTCH1-203ENST00000375274 TMEM135Q86UB9 458 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 C2CD4AQ8NCU7 369 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-203ENST00000375274 OR2T29Q8NH02 315 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 SLC38A4Q969I6 547 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 PYCR2Q96C36 320 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF599Q96NL3 588 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 SMOQ99835 787 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 TRIM8Q9BZR9 551 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 DCSTAMPQ9H295 470 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 NKIRAS2Q9NYR9 191 aa11.34□□□□□ -0.59
PTCH1-203ENST00000375274 LSM1O15116 133 aaKnown RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 GRM6O15303 877 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 CHRM5P08912 532 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 MVKQ03426 396 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 SLC10A2Q12908 348 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 NOL9Q5SY16 702 aaKnown RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 HLA-DQA1Q5Y7H0 255 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 USP30Q70CQ3 517 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 USP43Q70EL4 1123 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 RNF44Q7L0R7 432 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 MINDY2Q8NBR6 621 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 KIAA1191Q96A73 305 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 AP2M1Q96CW1 435 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 KCNA7Q96RP8 456 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 MAGEE1Q9HCI5 957 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF780BQ9Y6R6 833 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 KDM3BQ7LBC6 1761 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ENPP3O14638 875 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 CLPXO76031 633 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 OR5F1O95221 314 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ADH1AP07327 375 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 KCNE1P15382 129 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF182P17025 639 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 DNAJA1P31689 397 aaKnown RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 LGALS3BPQ08380 585 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 CMPK2Q5EBM0 449 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 CYP2U1Q7Z449 544 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 C2orf73Q8N5S3 287 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ADAMTS15Q8TE58 950 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 SLC45A3Q96JT2 553 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 CYP2S1Q96SQ9 504 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 KLHL31Q9H511 634 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 MOV10Q9HCE1 1003 aaKnown RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 TRPS1Q9UHF7 1281 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 FBXO10Q9UK96 956 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 CFL2Q9Y281 166 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 POLR1DQ9Y2S0 133 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 KCTD3Q9Y597 815 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 HS3ST4Q9Y661 456 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 LOC100130705A0A1B0GUX0 176 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 FAM86C2PA6NEL3 165 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 NEDD8-MDP1E9PL57 170 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 G6PDP11413 515 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 IL7RP16871 459 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ARSFP54793 590 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 DIO3P55073 304 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 PITX1P78337 314 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 NFKB2Q00653 900 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 DSC3Q14574 896 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 TCEA2Q15560 299 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF678Q5SXM1 525 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF773Q6PK81 442 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 COLGALT2Q8IYK4 626 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 NAT16Q8N8M0 369 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF420Q8TAQ5 688 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 EXOSC8Q96B26 276 aaKnown RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 MOCOSQ96EN8 888 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 CNPPD1Q9BV87 410 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 POLR2J2Q9GZM3 115 aaKnown RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 RPF2Q9H7B2 306 aaKnown RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 MRPS23Q9Y3D9 190 aaKnown RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 OAS3Q9Y6K5 1087 aaKnown RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 PMF1-BGLAPU3KQ54 211 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ROBO1Q9Y6N7 1651 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 CHST10O43529 356 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ABCB7O75027 752 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 SNNO75324 88 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 NME6O75414 186 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-203ENST00000375274 PGRP06401 933 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 ETV4P43268 484 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 MAPK12P53778 367 aa11.33□□□□□ -0.6
PTCH1-203ENST00000375274 SH3D19Q5HYK7 790 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms