RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 PSD3Q9NYI0 1048 aa16.8■□□□□ 0.28
HLA-DMA-201ENST00000374843 CD274Q9NZQ7 290 aa16.8■□□□□ 0.28
HLA-DMA-201ENST00000374843 SUSD2Q9UGT4 822 aa16.8■□□□□ 0.28
HLA-DMA-201ENST00000374843 PTBP2Q9UKA9 531 aaKnown RBP16.8■□□□□ 0.28
HLA-DMA-201ENST00000374843 PILRBQ9UKJ0 227 aa16.8■□□□□ 0.28
HLA-DMA-201ENST00000374843 IFRD1O00458 451 aaPredicted RBP16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 SNX2O60749 519 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 SNUPNO95149 360 aaKnown RBP16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 S100BP04271 92 aaPredicted RBP16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 RPN2P04844 631 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 NEFHP12036 1026 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 IMPDH1P20839 514 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 GGT5P36269 586 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 DPP6P42658 865 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 RPIAP49247 311 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 DHPSP49366 369 aaPredicted RBP16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 HNMTP50135 292 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 OCRLQ01968 901 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 STX3Q13277 289 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 RCN2Q14257 317 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 PCBP2Q15366 365 aaKnown RBP eCLIP16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 TEAD4Q15561 434 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 UAP1L1Q3KQV9 507 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 ZNF678Q5SXM1 525 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 TTC23LQ6PF05 361 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 ABRAXAS1Q6UWZ7 409 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 ZCCHC23Q6ZST2 131 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 RAB44Q7Z6P3 723 aaPredicted RBP16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 KLHDC8AQ8IYD2 350 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 SPDYE1Q8NFV5 336 aaPredicted RBP16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 PPP1R14CQ8TAE6 165 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 MCOLN3Q8TDD5 553 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 FBXL8Q96CD0 374 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 CHMP6Q96FZ7 201 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 C7orf26Q96N11 449 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 TRMOQ9BU70 441 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 LRRC61Q9BV99 259 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 DRC3Q9H069 523 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 TCEAL2Q9H3H9 227 aaPredicted RBP16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 ERVMER34-1Q9H9K5 563 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 UTP6Q9NYH9 597 aaKnown RBP16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 TBC1D29Q9UFV1 150 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 APOBEC3BQ9UH17 382 aaKnown RBP16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 WDR37Q9Y2I8 494 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 ABCA7Q8IZY2 2146 aa16.79■□□□□ 0.28
HLA-DMA-201ENST00000374843 PRR33A8MZF0 331 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 GALR2O43603 387 aaPredicted RBP16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 ANXA5P08758 320 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 HIST1H2AGP0C0S8 130 aaPredicted RBP16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 GNSP15586 552 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 HIST1H2ADP20671 130 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 MAP4P27816 1152 aaKnown RBP16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 BDKRB1P46663 353 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 NAGLUP54802 743 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 FRMD7Q6ZUT3 714 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 RD3Q7Z3Z2 195 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 OR5K2Q8NHB8 316 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 CCL4L1Q8NHW4 92 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 MAGEC3Q8TD91 643 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 ZNF483Q8TF39 744 aaPredicted RBP16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 TFGQ92734 400 aaPredicted RBP16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 PHF21BQ96EK2 531 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 HIST1H2AHQ96KK5 128 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 CCDC138Q96M89 665 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 HIST1H2AJQ99878 128 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 TMEM79Q9BSE2 394 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 H2AFJQ9BTM1 129 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 GSTO2Q9H4Y5 243 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 THAP1Q9NVV9 213 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 ARL15Q9NXU5 204 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 HAO1Q9UJM8 370 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 TNPO3Q9Y5L0 923 aaKnown RBP16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 THADAQ6YHU6 1953 aa16.78■□□□□ 0.28
HLA-DMA-201ENST00000374843 ATXN2Q99700 1313 aaKnown RBP16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 GMNCA6NCL1 334 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 PABPN1LA6NDY0 278 aaKnown RBP16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 FAM86C2PA6NEL3 165 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 NCF1BA6NI72 391 aaPredicted RBP16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 NCF1CA8MVU1 366 aaPredicted RBP16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 TAPBPO15533 448 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 EDF1O60869 148 aaKnown RBP16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 ERGP11308 486 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 NCF1P14598 390 aaPredicted RBP16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 JUNDP17535 347 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 AK4P27144 223 aaPredicted RBP16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 ARRB2P32121 409 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 ACTR1BP42025 376 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 CTSKP43235 329 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 SLC6A12P48065 614 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 C21orf59P57076 290 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 ACTR1AP61163 376 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 ABCE1P61221 599 aaKnown RBP16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 CBX1P83916 185 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 GALNT1Q10472 559 aaPredicted RBP16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 GRB7Q14451 532 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 UNC50Q53HI1 259 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 MBOAT1Q6ZNC8 495 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 CEP68Q76N32 757 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 TBC1D21Q8IYX1 336 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 CFAP61Q8NHU2 1237 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms